Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS23785 and ECOLIN_RS23790 are separated by 263 nucleotidesECOLIN_RS23790 and ECOLIN_RS23795 are separated by 111 nucleotidesECOLIN_RS23795 and ECOLIN_RS23800 overlap by 25 nucleotidesECOLIN_RS23800 and ECOLIN_RS23805 are separated by 0 nucleotides ECOLIN_RS23785: ECOLIN_RS23785 - YjcZ-like family protein, at 4,795,075 to 4,795,953 _RS23785 ECOLIN_RS23790: ECOLIN_RS23790 - glycine betaine/L-proline transporter ProP, at 4,796,217 to 4,797,719 _RS23790 ECOLIN_RS23795: ECOLIN_RS23795 - LpxT activity modulator PmrR, at 4,797,831 to 4,797,920 _RS23795 ECOLIN_RS23800: ECOLIN_RS23800 - two-component system sensor histidine kinase PmrB, at 4,797,896 to 4,798,996 _RS23800 ECOLIN_RS23805: ECOLIN_RS23805 - two-component system response regulator BasR, at 4,798,997 to 4,799,665 _RS23805
Group Condition ECOLIN_RS23785 ECOLIN_RS23790 ECOLIN_RS23795 ECOLIN_RS23800 ECOLIN_RS23805
carbon source L-Rhamnose -0.0 +0.0 -1.3 -0.4 +0.3
carbon source D-Glucose +0.0 +0.0 -1.7 +0.2 +0.1
no phage control Control_Nissle -0.3 -0.1 -0.3 -0.4 -0.1
phage CEV1 +0.2 -0.4 -1.1 +0.0 +0.2
phage K25 +0.0 -0.2 -0.5 -0.4 +0.1
phage EV219 +0.2 -0.1 -0.4 +0.3 +0.1
no phage control Control_Nissle -0.2 -0.2 +0.7 +0.0 -0.0
phage Bas48 -0.1 -0.2 +0.7 +0.0 +0.0
phage Bas21 +0.1 -0.2 -0.6 +0.7 +0.5
phage Bas52 -0.2 -0.1 +0.9 -0.1 +0.0
phage Bas63 +0.0 -0.1 +0.8 -0.1 +0.0
phage Bas52 -0.0 -0.1 +0.5 -0.1 +0.4
phage RB68 -0.0 -0.1 +0.9 -0.2 +0.1
phage Bas37 +0.2 -0.1 -0.1 +0.3 +0.4
phage Phi92 +0.1 -0.2 +0.7 +0.2 -0.1
carbon source L-Arabinose -0.1 +0.1 +0.6 +0.1 +0.1
phage JK38 +0.2 -0.1 -0.1 +0.5 +0.3
phage Bas44 -0.1 -0.0 +0.7 -0.1 +0.4
phage TP7 +0.1 +0.0 -0.2 +0.6 +0.4
phage Bas37 +0.1 -0.1 +0.1 +0.5 +0.3
phage TP7 +0.3 -0.1 -0.3 +0.6 +0.4
phage JK38 +0.2 -0.1 +0.1 +0.6 +0.3
phage Bas21 +0.1 -0.2 +0.0 +0.5 +0.5
phage RB51 -0.1 -0.2 +1.3 +0.1 +0.2
phage Bas38 +0.1 -0.1 +0.3 +0.4 +0.4
phage Bas44 +0.1 -0.1 +0.7 +0.1 +0.4
phage Bas45 +0.1 +0.1 +0.1 +0.4 +0.9
phage Bas38 +0.1 -0.1 +0.5 +0.6 +0.4
phage Bas22 +0.0 -0.0 +1.0 +0.2 +0.4
phage P1vir +0.1 +0.0 +0.8 +0.9 +1.2
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