Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS23525 and ECOLIN_RS23530 are separated by 103 nucleotidesECOLIN_RS23530 and ECOLIN_RS23535 overlap by 8 nucleotidesECOLIN_RS23535 and ECOLIN_RS23540 are separated by 38 nucleotidesECOLIN_RS23540 and ECOLIN_RS23545 overlap by 4 nucleotides ECOLIN_RS23525: ECOLIN_RS23525 - LysR family transcriptional regulator, at 4,741,400 to 4,742,284 _RS23525 ECOLIN_RS23530: ECOLIN_RS23530 - CidA/LrgA family protein, at 4,742,388 to 4,742,798 _RS23530 ECOLIN_RS23535: ECOLIN_RS23535 - LrgB family protein, at 4,742,791 to 4,743,480 _RS23535 ECOLIN_RS23540: ECOLIN_RS23540 - cation/acetate symporter ActP, at 4,743,519 to 4,745,168 _RS23540 ECOLIN_RS23545: ECOLIN_RS23545 - DUF485 domain-containing protein, at 4,745,165 to 4,745,479 _RS23545
Group Condition ECOLIN_RS23525 ECOLIN_RS23530 ECOLIN_RS23535 ECOLIN_RS23540 ECOLIN_RS23545
carbon source L-Rhamnose -0.2 -0.5 +0.0 -0.4 -0.6
carbon source Casamino-acids +0.0 -0.0 -0.3 +0.0 -0.6
phage Bas38 -0.1 +0.0 -0.3 +0.0 -0.4
phage TP7 -0.1 +0.0 -0.1 -0.0 -0.5
carbon source D-Glucose -0.0 -0.0 -0.6 -0.2 +0.1
phage Bas38 +0.1 -0.1 -0.5 -0.1 -0.1
phage P1vir +0.0 -0.1 -0.2 -0.2 -0.2
phage JK16 -0.1 +0.0 -0.3 +0.1 -0.4
phage Bas48 +0.2 -0.1 -0.3 +0.1 -0.4
phage Bas10 +0.1 +0.1 -0.4 +0.0 -0.3
phage Bas37 +0.1 +0.0 -0.3 +0.1 -0.4
carbon source L-Arabinose +0.1 +0.0 -0.2 -0.1 -0.2
phage Bas63 +0.0 -0.3 +0.1 -0.0 -0.3
carbon source L-Arabinose +0.1 +0.1 -0.3 -0.1 -0.1
carbon source L-Rhamnose -0.3 +0.6 -0.7 -0.3 +0.4
phage Bas52 +0.1 +0.1 -0.3 +0.1 -0.2
phage Bas45 +0.0 +0.2 +0.0 -0.2 -0.2
phage Bas48 +0.2 +0.1 -0.1 -0.1 -0.2
no phage control Control_Nissle +0.1 +0.1 +0.1 -0.1 -0.2
carbon source Casamino-acids -0.0 +0.2 -0.0 +0.1 -0.2
phage Bas22 +0.2 +0.3 -0.1 +0.0 -0.3
phage Bas05 +0.1 -0.0 -0.1 -0.1 +0.3
phage Bas68 +0.2 -0.2 +0.1 +0.1 -0.1
phage Bas05 +0.2 -0.1 -0.1 -0.1 +0.4
carbon source D-Glucose +0.0 +0.3 -0.3 -0.0 +0.3
phage Bas27 +0.1 +0.2 -0.2 -0.0 +0.1
phage Bas04 +0.0 +0.1 -0.2 -0.0 +0.4
phage Bas22 +0.2 -0.1 +0.1 -0.0 +0.2
phage K25 +0.3 +0.1 +0.3 +0.0 -0.1
phage Phi92 +0.1 +0.2 +0.2 +0.2 +0.0
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