Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS23495 and ECOLIN_RS23500 are separated by 428 nucleotidesECOLIN_RS23500 and ECOLIN_RS23505 are separated by 35 nucleotidesECOLIN_RS23505 and ECOLIN_RS23510 are separated by 85 nucleotidesECOLIN_RS23510 and ECOLIN_RS23515 are separated by 547 nucleotides ECOLIN_RS23495: ECOLIN_RS23495 - YjcB family protein, at 4,734,495 to 4,734,776 _RS23495 ECOLIN_RS23500: ECOLIN_RS23500 - c-di-GMP phosphodiesterase PdeC, at 4,735,205 to 4,736,758 _RS23500 ECOLIN_RS23505: ECOLIN_RS23505 - superoxide response transcriptional regulator SoxS, at 4,736,794 to 4,737,117 _RS23505 ECOLIN_RS23510: ECOLIN_RS23510 - redox-sensitive transcriptional activator SoxR, at 4,737,203 to 4,737,667 _RS23510 ECOLIN_RS23515: ECOLIN_RS23515 - guanine/hypoxanthine transporter GhxP, at 4,738,215 to 4,739,564 _RS23515
Group Condition ECOLIN_RS23495 ECOLIN_RS23500 ECOLIN_RS23505 ECOLIN_RS23510 ECOLIN_RS23515
carbon source D-Glucose -0.3 -0.1 N.D. -0.6 -0.3
phage Bas10 -0.4 -0.1 N.D. -0.2 -0.1
carbon source L-Rhamnose +0.1 +0.1 N.D. -0.9 -0.1
phage K25 +0.0 -0.0 N.D. -0.4 -0.2
phage JK38 -0.1 -0.2 N.D. -0.2 +0.0
phage Bas45 -0.3 -0.2 N.D. -0.1 +0.2
phage JK16 -0.1 -0.2 N.D. -0.1 +0.0
carbon source Sodium-DL-Lactate -0.0 -0.1 N.D. -0.3 +0.1
phage RB51 -0.2 +0.1 N.D. -0.2 +0.0
phage Bas22 +0.2 -0.1 N.D. -0.2 -0.1
no phage control Control_Nissle +0.3 -0.0 N.D. -0.3 -0.1
phage K20 -0.1 -0.0 N.D. -0.3 +0.2
no phage control Control_Nissle -0.0 +0.1 N.D. -0.3 +0.1
phage Bas63 +0.1 +0.2 N.D. -0.2 -0.2
phage Bas21 -0.1 -0.2 N.D. +0.3 -0.1
phage Bas21 -0.2 -0.1 N.D. +0.2 +0.1
phage K20 +0.2 +0.2 N.D. -0.2 -0.2
phage CEV1 -0.4 +0.1 N.D. +0.5 -0.0
phage RB68 +0.1 -0.0 N.D. +0.2 -0.1
carbon source Casamino-acids -0.0 +0.2 N.D. +0.1 -0.2
phage Bas27 -0.0 -0.2 N.D. +0.3 +0.1
carbon source Casamino-acids +0.0 +0.1 N.D. +0.3 -0.2
phage Bas48 +0.2 +0.1 N.D. +0.0 -0.1
phage Bas63 +0.4 +0.1 N.D. -0.2 -0.0
phage Bas37 -0.1 -0.1 N.D. +0.3 +0.1
phage Bas27 -0.1 +0.0 N.D. +0.3 +0.2
phage Bas04 -0.1 -0.0 N.D. +0.4 +0.1
phage Bas44 +0.1 +0.1 N.D. +0.2 -0.0
phage Bas38 -0.1 +0.0 N.D. +0.3 +0.2
phage P1vir +0.5 +0.0 N.D. +0.0 -0.0
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