Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS23485 and ECOLIN_RS23490 are separated by 254 nucleotidesECOLIN_RS23490 and ECOLIN_RS23495 are separated by 98 nucleotidesECOLIN_RS23495 and ECOLIN_RS23500 are separated by 428 nucleotidesECOLIN_RS23500 and ECOLIN_RS23505 are separated by 35 nucleotides ECOLIN_RS23485: ECOLIN_RS23485 - excinuclease ABC subunit UvrA, at 4,730,783 to 4,733,605 _RS23485 ECOLIN_RS23490: ECOLIN_RS23490 - single-stranded DNA-binding protein SSB1, at 4,733,860 to 4,734,396 _RS23490 ECOLIN_RS23495: ECOLIN_RS23495 - YjcB family protein, at 4,734,495 to 4,734,776 _RS23495 ECOLIN_RS23500: ECOLIN_RS23500 - c-di-GMP phosphodiesterase PdeC, at 4,735,205 to 4,736,758 _RS23500 ECOLIN_RS23505: ECOLIN_RS23505 - superoxide response transcriptional regulator SoxS, at 4,736,794 to 4,737,117 _RS23505
Group Condition ECOLIN_RS23485 ECOLIN_RS23490 ECOLIN_RS23495 ECOLIN_RS23500 ECOLIN_RS23505
phage Bas45 -0.3 N.D. -0.3 -0.2 N.D.
phage Bas10 +0.0 N.D. -0.4 -0.1 N.D.
carbon source D-Glucose -0.1 N.D. -0.3 -0.1 N.D.
phage Bas21 -0.0 N.D. -0.2 -0.1 N.D.
carbon source D-Glucose -0.2 N.D. -0.2 +0.0 N.D.
carbon source L-Rhamnose -0.2 N.D. -0.1 +0.0 N.D.
phage Bas21 -0.0 N.D. -0.1 -0.2 N.D.
phage JK16 +0.0 N.D. -0.1 -0.2 N.D.
phage CEV1 +0.1 N.D. -0.4 +0.1 N.D.
phage Bas10 -0.2 N.D. -0.1 +0.1 N.D.
phage Bas27 +0.1 N.D. -0.0 -0.2 N.D.
phage CEV1 -0.0 N.D. -0.2 +0.1 N.D.
phage RB51 -0.0 N.D. -0.2 +0.1 N.D.
phage JK38 +0.2 N.D. -0.1 -0.2 N.D.
phage Bas37 +0.1 N.D. -0.1 -0.1 N.D.
phage Bas27 +0.1 N.D. -0.1 +0.0 N.D.
phage Bas68 +0.1 N.D. -0.1 +0.1 N.D.
phage Bas05 -0.0 N.D. -0.1 +0.2 N.D.
carbon source L-Arabinose +0.1 N.D. -0.1 +0.2 N.D.
carbon source Casamino-acids -0.0 N.D. -0.0 +0.2 N.D.
carbon source L-Rhamnose -0.1 N.D. +0.1 +0.1 N.D.
phage P1vir -0.2 N.D. +0.5 +0.0 N.D.
phage Bas63 -0.0 N.D. +0.1 +0.2 N.D.
phage Bas38 +0.0 N.D. +0.2 +0.2 N.D.
no phage control Control_Nissle +0.1 N.D. +0.3 -0.0 N.D.
phage Bas48 +0.0 N.D. +0.2 +0.1 N.D.
phage K25 +0.0 N.D. +0.2 +0.2 N.D.
phage K20 +0.1 N.D. +0.2 +0.2 N.D.
phage Bas63 -0.1 N.D. +0.4 +0.1 N.D.
phage JK16 +0.1 N.D. +0.3 +0.0 N.D.
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