Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS23480 and ECOLIN_RS23485 are separated by 34 nucleotidesECOLIN_RS23485 and ECOLIN_RS23490 are separated by 254 nucleotidesECOLIN_RS23490 and ECOLIN_RS23495 are separated by 98 nucleotidesECOLIN_RS23495 and ECOLIN_RS23500 are separated by 428 nucleotides ECOLIN_RS23480: ECOLIN_RS23480 - MmcQ/YjbR family DNA-binding protein, at 4,730,392 to 4,730,748 _RS23480 ECOLIN_RS23485: ECOLIN_RS23485 - excinuclease ABC subunit UvrA, at 4,730,783 to 4,733,605 _RS23485 ECOLIN_RS23490: ECOLIN_RS23490 - single-stranded DNA-binding protein SSB1, at 4,733,860 to 4,734,396 _RS23490 ECOLIN_RS23495: ECOLIN_RS23495 - YjcB family protein, at 4,734,495 to 4,734,776 _RS23495 ECOLIN_RS23500: ECOLIN_RS23500 - c-di-GMP phosphodiesterase PdeC, at 4,735,205 to 4,736,758 _RS23500
Group Condition ECOLIN_RS23480 ECOLIN_RS23485 ECOLIN_RS23490 ECOLIN_RS23495 ECOLIN_RS23500
phage Bas45 -0.5 -0.3 N.D. -0.3 -0.2
carbon source D-Glucose -0.2 -0.1 N.D. -0.3 -0.1
phage Bas21 -0.3 -0.0 N.D. -0.1 -0.2
phage Bas52 -0.4 +0.1 N.D. -0.1 -0.1
phage Bas10 +0.0 +0.0 N.D. -0.4 -0.1
phage Bas48 -0.6 +0.0 N.D. +0.1 -0.0
phage Bas10 -0.2 -0.2 N.D. -0.1 +0.1
phage Bas27 -0.4 +0.1 N.D. -0.1 +0.0
phage CEV1 -0.1 -0.0 N.D. -0.2 +0.1
phage RB51 -0.1 -0.0 N.D. -0.2 +0.1
phage Bas37 -0.2 +0.1 N.D. -0.1 -0.1
carbon source L-Arabinose -0.3 +0.1 N.D. -0.1 +0.2
phage Bas21 +0.3 -0.0 N.D. -0.2 -0.1
no phage control Control_Nissle -0.4 +0.1 N.D. +0.3 -0.0
phage Bas63 -0.3 -0.0 N.D. +0.1 +0.2
phage Bas05 -0.2 -0.0 N.D. -0.1 +0.2
carbon source D-Glucose +0.3 -0.2 N.D. -0.2 +0.0
phage JK38 +0.1 +0.2 N.D. -0.1 -0.2
phage CEV1 +0.2 +0.1 N.D. -0.4 +0.1
phage Bas51 -0.3 +0.1 N.D. +0.0 +0.1
carbon source L-Rhamnose +0.3 -0.2 N.D. -0.1 +0.0
phage K25 -0.4 +0.0 N.D. +0.2 +0.2
phage Bas31 +0.3 -0.1 N.D. -0.1 +0.0
phage Bas63 -0.1 -0.1 N.D. +0.4 +0.1
phage JK16 -0.2 +0.1 N.D. +0.3 +0.0
phage P1vir +0.1 -0.2 N.D. +0.5 +0.0
phage Bas38 +0.1 +0.0 N.D. +0.2 +0.2
phage Bas37 +0.2 +0.2 N.D. +0.0 +0.0
carbon source L-Rhamnose +0.4 -0.1 N.D. +0.1 +0.1
phage K20 +0.3 +0.1 N.D. +0.2 +0.2
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