Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS23460 and ECOLIN_RS23465 overlap by 8 nucleotidesECOLIN_RS23465 and ECOLIN_RS23470 are separated by 276 nucleotidesECOLIN_RS23470 and ECOLIN_RS23475 are separated by 110 nucleotidesECOLIN_RS23475 and ECOLIN_RS23480 are separated by 3 nucleotides ECOLIN_RS23460: ECOLIN_RS23460 - sigma-54 dependent transcriptional regulator, at 4,725,700 to 4,727,058 _RS23460 ECOLIN_RS23465: ECOLIN_RS23465 - ATP-binding protein, at 4,727,051 to 4,728,871 _RS23465 ECOLIN_RS23470: ECOLIN_RS23470 - acid phosphatase AphA, at 4,729,148 to 4,729,861 _RS23470 ECOLIN_RS23475: ECOLIN_RS23475 - secondary thiamine-phosphate synthase enzyme YjbQ, at 4,729,972 to 4,730,388 _RS23475 ECOLIN_RS23480: ECOLIN_RS23480 - MmcQ/YjbR family DNA-binding protein, at 4,730,392 to 4,730,748 _RS23480
Group Condition ECOLIN_RS23460 ECOLIN_RS23465 ECOLIN_RS23470 ECOLIN_RS23475 ECOLIN_RS23480
phage Bas45 -0.4 -0.1 -0.6 +0.2 -0.5
phage Bas44 -0.5 -0.1 +0.2 -0.5 -0.2
carbon source L-Rhamnose -1.2 +0.1 -0.2 -0.2 +0.4
phage TP7 -0.6 -0.2 +0.4 -0.3 -0.1
carbon source L-Arabinose -0.8 +0.2 -0.1 +0.5 -0.3
phage K25 +0.6 +0.1 -0.2 -0.5 -0.4
phage Bas63 +1.1 -0.3 -0.2 -0.2 -0.3
phage K20 +1.3 -0.2 -0.4 -0.7 +0.3
phage Bas04 +1.4 +0.0 -0.2 -0.7 -0.1
phage Bas52 +0.7 -0.2 +0.3 +0.1 -0.4
phage Phi92 +1.1 -0.1 -0.2 -0.4 -0.1
phage Bas48 +0.6 -0.2 +0.1 +0.5 -0.6
phage Bas63 +1.7 -0.0 -0.1 -0.8 -0.1
phage Bas52 +1.1 -0.0 +0.2 -0.4 -0.2
phage Phi92 +0.8 -0.2 -0.3 +0.4 -0.0
phage Bas51 +1.3 +0.2 -0.3 -0.1 -0.3
phage Bas04 +1.5 -0.3 +0.2 -0.3 -0.2
phage Bas37 +1.2 -0.5 +0.2 +0.3 -0.2
phage Bas68 +1.5 -0.1 -0.2 +0.0 -0.2
phage Bas68 +1.5 +0.0 -0.3 -0.1 -0.0
phage Bas31 +1.2 -0.1 +0.2 +0.1 -0.2
phage Bas22 +1.0 +0.1 -0.1 +0.3 -0.1
phage Bas37 +1.0 -0.1 +0.2 -0.2 +0.2
phage K20 +1.5 +0.1 -0.1 +0.1 -0.2
no phage control Control_Nissle +2.0 -0.0 +0.1 -0.0 -0.4
phage Bas22 +2.0 +0.1 -0.3 -0.2 +0.1
phage K25 +1.1 +0.3 +0.2 +0.1 +0.1
no phage control Control_Nissle +2.4 -0.1 -0.0 -0.0 -0.1
phage RB68 +1.9 -0.1 +0.1 +0.3 -0.0
carbon source L-Rhamnose +0.7 +0.5 +0.2 +0.9 +0.3
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