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Protein
Homologs
Fitness for 5 genes in
Escherichia coli Nissle 1917
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500 nt
ECOLIN_RS22570 and ECOLIN_RS22575 are separated by 54 nucleotides
ECOLIN_RS22575 and ECOLIN_RS22580 are separated by 107 nucleotides
ECOLIN_RS22580 and ECOLIN_RS22585 are separated by 100 nucleotides
ECOLIN_RS22585 and ECOLIN_RS22590 are separated by 211 nucleotides
ECOLIN_RS22570: ECOLIN_RS22570 - CDP-diacylglycerol diphosphatase, at 4,532,727 to 4,533,482
_RS22570
ECOLIN_RS22575: ECOLIN_RS22575 - triose-phosphate isomerase, at 4,533,537 to 4,534,304
_RS22575
ECOLIN_RS22580: ECOLIN_RS22580 - DUF1454 family protein, at 4,534,412 to 4,535,011
_RS22580
ECOLIN_RS22585: ECOLIN_RS22585 - DUF805 domain-containing protein, at 4,535,112 to 4,535,552
_RS22585
ECOLIN_RS22590: ECOLIN_RS22590 - DUF406 domain-containing protein, at 4,535,764 to 4,536,063
_RS22590
Group
Condition
ECOLIN
_RS22570
ECOLIN
_RS22575
ECOLIN
_RS22580
ECOLIN
_RS22585
ECOLIN
_RS22590
phage
EV219
-0.7
-4.4
-1.8
N.D.
-0.5
phage
TP7
-1.2
-2.3
-1.8
N.D.
-0.3
phage
Bas31
-0.5
-3.5
-1.1
N.D.
+0.0
phage
TP7
-0.7
-2.9
-1.2
N.D.
-0.1
carbon source
Sodium-DL-Lactate
+0.1
-4.6
-0.3
N.D.
-0.0
phage
Bas21
-0.6
-2.5
-1.3
N.D.
-0.3
carbon source
Casamino-acids
-0.1
-4.4
-0.2
N.D.
+0.1
phage
Bas37
-0.7
-2.6
-1.2
N.D.
-0.1
phage
Bas21
-0.6
-2.8
-1.1
N.D.
-0.0
phage
Bas31
-0.5
-2.7
-1.2
N.D.
-0.0
phage
CEV1
-0.1
-3.1
-0.9
N.D.
-0.1
phage
Bas10
-0.0
-3.6
-0.2
N.D.
-0.1
phage
EV219
-0.6
-1.6
-1.5
N.D.
-0.1
phage
Bas27
-0.1
-3.0
-0.7
N.D.
-0.1
phage
JK16
-0.1
-2.9
-0.6
N.D.
-0.2
carbon source
Casamino-acids
-0.1
-3.4
-0.3
N.D.
+0.2
phage
JK38
-0.6
-1.8
-1.0
N.D.
-0.1
phage
Bas37
-1.0
-1.0
-1.3
N.D.
-0.1
phage
Bas45
-0.9
-1.3
-1.1
N.D.
+0.1
phage
Bas38
-0.2
-1.7
-1.2
N.D.
-0.1
phage
Bas05
-0.1
-2.6
-0.3
N.D.
-0.2
carbon source
Sodium-DL-Lactate
+0.1
-3.1
-0.3
N.D.
+0.1
phage
JK38
-0.7
-1.3
-1.0
N.D.
-0.1
phage
Bas10
+0.1
-2.4
-0.1
N.D.
-0.1
phage
Phi92
+0.1
-2.5
-0.1
N.D.
+0.1
phage
Bas04
-0.1
-1.9
-0.3
N.D.
-0.2
phage
Bas22
-0.4
-1.1
-0.9
N.D.
+0.1
phage
Bas44
+0.1
-2.2
+0.2
N.D.
-0.1
phage
K25
+0.0
-2.0
-0.0
N.D.
+0.2
phage
Bas44
-0.3
-1.6
+0.3
N.D.
+0.1
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