Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli Nissle 1917
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 62 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
ECOLIN_RS22140 and ECOLIN_RS22145 are separated by 41 nucleotides
ECOLIN_RS22145 and ECOLIN_RS22150 overlap by 4 nucleotides
ECOLIN_RS22150 and ECOLIN_RS22155 are separated by 166 nucleotides
ECOLIN_RS22155 and ECOLIN_RS22160 are separated by 45 nucleotides
ECOLIN_RS22140: ECOLIN_RS22140 - Sec-independent protein translocase subunit TatC, at 4,446,554 to 4,447,330
_RS22140
ECOLIN_RS22145: ECOLIN_RS22145 - 3'-5' ssDNA/RNA exonuclease TatD, at 4,447,372 to 4,448,154
_RS22145
ECOLIN_RS22150: ECOLIN_RS22150 - transcription/translation regulatory transformer protein RfaH, at 4,448,151 to 4,448,639
_RS22150
ECOLIN_RS22155: ECOLIN_RS22155 - 4-hydroxy-3-polyprenylbenzoate decarboxylase, at 4,448,806 to 4,450,299
_RS22155
ECOLIN_RS22160: ECOLIN_RS22160 - NAD(P)H-flavin reductase, at 4,450,345 to 4,451,046
_RS22160
Group
Condition
ECOLIN
_RS22140
ECOLIN
_RS22145
ECOLIN
_RS22150
ECOLIN
_RS22155
ECOLIN
_RS22160
phage
JK38
-2.0
-0.0
-11.5
N.D.
-2.9
phage
EV219
+0.1
+0.1
-11.2
N.D.
-2.7
phage
Bas37
-0.8
-0.1
-11.3
N.D.
-1.3
phage
EV219
+0.2
+0.1
-11.0
N.D.
-1.8
phage
Bas31
-0.1
-0.3
-10.5
N.D.
-1.4
phage
Bas27
-0.2
-0.0
-10.7
N.D.
-1.1
phage
Bas27
+0.1
+0.1
-10.3
N.D.
-1.2
phage
JK38
-0.6
-0.0
-9.2
N.D.
-1.5
phage
Bas37
-0.5
-0.1
-9.0
N.D.
-1.2
phage
Bas31
-0.5
-0.0
-8.2
N.D.
-1.6
phage
Bas05
-0.3
-0.0
-8.8
N.D.
-0.7
phage
Bas04
+0.2
+0.1
-8.4
N.D.
-0.7
phage
Bas22
+0.3
+0.2
-7.0
N.D.
-2.4
phage
Bas45
-3.1
+0.2
-4.1
N.D.
-1.7
phage
Bas22
+0.6
-0.0
-6.2
N.D.
-2.0
phage
Bas05
+0.1
-0.2
-5.9
N.D.
-0.6
phage
Bas04
+0.1
-0.1
-6.0
N.D.
-0.5
phage
P1vir
-0.3
+0.2
-6.5
N.D.
+0.3
phage
JK16
-0.4
-0.1
-4.6
N.D.
-1.0
phage
Bas21
+0.7
-0.0
-4.7
N.D.
-1.8
phage
Bas21
+1.0
+0.0
-4.5
N.D.
-2.1
phage
Bas10
-0.1
+0.0
-4.1
N.D.
-0.6
phage
JK16
+0.4
+0.1
-4.6
N.D.
-0.7
phage
TP7
-3.1
-0.0
+2.8
N.D.
-3.9
phage
Bas10
-0.0
-0.0
-3.3
N.D.
-0.5
carbon source
Casamino-acids
-0.2
-0.1
-0.4
N.D.
-2.9
phage
Phi92
+0.5
+0.0
-2.1
N.D.
-1.2
phage
CEV1
+0.2
-0.0
-1.7
N.D.
-1.3
phage
Phi92
+0.3
-0.1
-2.4
N.D.
-0.5
phage
TP7
-1.5
-0.1
+4.0
N.D.
-1.9
remove
ECOLIN_RS22140
plot
remove
ECOLIN_RS22145
plot
remove
ECOLIN_RS22150
remove
ECOLIN_RS22155
plot
remove
ECOLIN_RS22160
plot