Fitness for 5 genes in Escherichia coli Nissle 1917

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 62 experiments or choose conditions or try the comparative fitness browser

500 ntECOLIN_RS22140 and ECOLIN_RS22145 are separated by 41 nucleotidesECOLIN_RS22145 and ECOLIN_RS22150 overlap by 4 nucleotidesECOLIN_RS22150 and ECOLIN_RS22155 are separated by 166 nucleotidesECOLIN_RS22155 and ECOLIN_RS22160 are separated by 45 nucleotides ECOLIN_RS22140: ECOLIN_RS22140 - Sec-independent protein translocase subunit TatC, at 4,446,554 to 4,447,330 _RS22140 ECOLIN_RS22145: ECOLIN_RS22145 - 3'-5' ssDNA/RNA exonuclease TatD, at 4,447,372 to 4,448,154 _RS22145 ECOLIN_RS22150: ECOLIN_RS22150 - transcription/translation regulatory transformer protein RfaH, at 4,448,151 to 4,448,639 _RS22150 ECOLIN_RS22155: ECOLIN_RS22155 - 4-hydroxy-3-polyprenylbenzoate decarboxylase, at 4,448,806 to 4,450,299 _RS22155 ECOLIN_RS22160: ECOLIN_RS22160 - NAD(P)H-flavin reductase, at 4,450,345 to 4,451,046 _RS22160
Group Condition ECOLIN_RS22140 ECOLIN_RS22145 ECOLIN_RS22150 ECOLIN_RS22155 ECOLIN_RS22160
phage JK38 -2.0 -0.0 -11.5 N.D. -2.9
phage EV219 +0.1 +0.1 -11.2 N.D. -2.7
phage Bas37 -0.8 -0.1 -11.3 N.D. -1.3
phage EV219 +0.2 +0.1 -11.0 N.D. -1.8
phage Bas31 -0.1 -0.3 -10.5 N.D. -1.4
phage Bas27 -0.2 -0.0 -10.7 N.D. -1.1
phage Bas27 +0.1 +0.1 -10.3 N.D. -1.2
phage JK38 -0.6 -0.0 -9.2 N.D. -1.5
phage Bas37 -0.5 -0.1 -9.0 N.D. -1.2
phage Bas31 -0.5 -0.0 -8.2 N.D. -1.6
phage Bas05 -0.3 -0.0 -8.8 N.D. -0.7
phage Bas04 +0.2 +0.1 -8.4 N.D. -0.7
phage Bas22 +0.3 +0.2 -7.0 N.D. -2.4
phage Bas45 -3.1 +0.2 -4.1 N.D. -1.7
phage Bas22 +0.6 -0.0 -6.2 N.D. -2.0
phage Bas05 +0.1 -0.2 -5.9 N.D. -0.6
phage Bas04 +0.1 -0.1 -6.0 N.D. -0.5
phage P1vir -0.3 +0.2 -6.5 N.D. +0.3
phage JK16 -0.4 -0.1 -4.6 N.D. -1.0
phage Bas21 +0.7 -0.0 -4.7 N.D. -1.8
phage Bas21 +1.0 +0.0 -4.5 N.D. -2.1
phage Bas10 -0.1 +0.0 -4.1 N.D. -0.6
phage JK16 +0.4 +0.1 -4.6 N.D. -0.7
phage TP7 -3.1 -0.0 +2.8 N.D. -3.9
phage Bas10 -0.0 -0.0 -3.3 N.D. -0.5
carbon source Casamino-acids -0.2 -0.1 -0.4 N.D. -2.9
phage Phi92 +0.5 +0.0 -2.1 N.D. -1.2
phage CEV1 +0.2 -0.0 -1.7 N.D. -1.3
phage Phi92 +0.3 -0.1 -2.4 N.D. -0.5
phage TP7 -1.5 -0.1 +4.0 N.D. -1.9
remove
ECOLIN_RS22140
plot
remove
ECOLIN_RS22145
plot
remove
ECOLIN_RS22150
remove
ECOLIN_RS22155
plot
remove
ECOLIN_RS22160
plot