Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS21660 and ECOLIN_RS21665 are separated by 64 nucleotidesECOLIN_RS21665 and ECOLIN_RS21670 are separated by 2 nucleotidesECOLIN_RS21670 and ECOLIN_RS21675 overlap by 4 nucleotidesECOLIN_RS21675 and ECOLIN_RS21680 are separated by 149 nucleotides ECOLIN_RS21660: ECOLIN_RS21660 - branched-chain-amino-acid transaminase, at 4,350,154 to 4,351,083 _RS21660 ECOLIN_RS21665: ECOLIN_RS21665 - dihydroxy-acid dehydratase, at 4,351,148 to 4,352,998 _RS21665 ECOLIN_RS21670: ECOLIN_RS21670 - threonine ammonia-lyase, biosynthetic, at 4,353,001 to 4,354,545 _RS21670 ECOLIN_RS21675: ECOLIN_RS21675 - HTH-type transcriptional activator IlvY, at 4,354,542 to 4,355,432 _RS21675 ECOLIN_RS21680: ECOLIN_RS21680 - ketol-acid reductoisomerase, at 4,355,582 to 4,357,057 _RS21680
Group Condition ECOLIN_RS21660 ECOLIN_RS21665 ECOLIN_RS21670 ECOLIN_RS21675 ECOLIN_RS21680
carbon source Sodium-DL-Lactate -3.5 -3.6 -3.0 -2.7 -4.2
carbon source Sodium-DL-Lactate -3.1 -3.3 -2.5 -2.5 -3.3
carbon source D-Glucose +1.3 -4.6 +0.8 -3.8 -4.7
carbon source L-Arabinose -1.4 -3.1 +0.3 -3.2 -3.3
carbon source L-Arabinose -1.0 -2.4 +0.2 -3.1 -2.9
carbon source D-Glucose +0.6 -3.7 +1.3 -3.3 -3.6
carbon source L-Rhamnose -1.6 -1.7 -0.9 -0.5 -1.3
carbon source L-Rhamnose -0.6 -0.8 -0.4 -0.1 -0.8
phage Phi92 +0.0 -0.0 -0.1 -0.3 -0.1
phage CEV1 +0.0 -0.1 -0.1 -0.2 -0.0
phage Bas31 -0.1 +0.0 -0.1 +0.0 -0.2
phage Phi92 -0.1 +0.0 -0.1 +0.0 -0.2
phage TP7 +0.2 -0.0 -0.0 -0.2 -0.2
phage EV219 +0.1 -0.1 -0.0 -0.1 -0.1
phage Bas68 -0.2 -0.0 +0.0 -0.1 +0.1
phage Bas21 +0.1 -0.1 -0.1 +0.0 -0.1
phage Bas63 -0.1 +0.1 -0.0 -0.1 -0.0
phage Bas48 -0.0 +0.1 -0.1 -0.0 -0.2
phage Bas63 -0.1 +0.1 -0.1 -0.1 +0.0
phage Bas45 +0.1 +0.1 -0.2 -0.1 +0.1
phage RB51 +0.0 +0.1 +0.1 -0.1 -0.0
phage Bas10 +0.2 -0.1 +0.1 -0.1 +0.0
phage CEV1 +0.1 -0.1 +0.1 +0.1 -0.1
phage RB68 +0.0 +0.2 -0.2 +0.1 +0.2
phage Bas22 +0.1 +0.1 -0.0 +0.1 +0.1
phage K25 +0.1 +0.2 -0.2 +0.1 +0.2
no phage control Control_Nissle +0.1 +0.1 +0.1 +0.0 +0.2
phage RB51 +0.2 +0.0 +0.0 +0.1 +0.2
phage Bas10 +0.2 -0.0 +0.2 +0.1 +0.0
phage P1vir +0.3 +0.1 +0.1 +0.1 +0.0
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