Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS21560 and ECOLIN_RS21565 are separated by 24 nucleotidesECOLIN_RS21565 and ECOLIN_RS21570 are separated by 125 nucleotidesECOLIN_RS21570 and ECOLIN_RS21575 are separated by 3 nucleotidesECOLIN_RS21575 and ECOLIN_RS30955 are separated by 56 nucleotides ECOLIN_RS21560: ECOLIN_RS21560 - ribose ABC transporter permease, at 4,332,043 to 4,333,008 _RS21560 ECOLIN_RS21565: ECOLIN_RS21565 - ribose ABC transporter substrate-binding protein RbsB, at 4,333,033 to 4,333,923 _RS21565 ECOLIN_RS21570: ECOLIN_RS21570 - ribokinase, at 4,334,049 to 4,334,978 _RS21570 ECOLIN_RS21575: ECOLIN_RS21575 - ribose operon transcriptional repressor RbsR, at 4,334,982 to 4,335,950 _RS21575 ECOLIN_RS30955: ECOLIN_RS30955 - IS3-like element ISEc52 family transposase, at 4,336,007 to 4,337,176 _RS30955
Group Condition ECOLIN_RS21560 ECOLIN_RS21565 ECOLIN_RS21570 ECOLIN_RS21575 ECOLIN_RS30955
phage TP7 -0.9 -0.9 -0.5 +0.1 N.D.
phage Bas37 -0.8 -0.8 -0.2 +0.1 N.D.
phage Bas38 -0.4 -0.7 -0.2 +0.1 N.D.
phage JK38 -0.5 -0.4 -0.3 +0.1 N.D.
phage Bas37 -0.7 -0.4 -0.2 +0.2 N.D.
phage JK38 -0.4 -0.7 -0.0 +0.2 N.D.
phage TP7 -0.6 -0.3 -0.1 +0.1 N.D.
phage Bas38 -0.3 -0.4 -0.2 +0.1 N.D.
phage Bas21 -0.5 -0.5 -0.0 +0.3 N.D.
phage Bas21 -0.5 -0.2 -0.2 +0.2 N.D.
phage Bas31 -0.3 -0.3 -0.2 +0.2 N.D.
carbon source L-Rhamnose -0.2 -0.3 +0.1 -0.3 N.D.
phage Bas31 -0.4 -0.3 -0.0 +0.1 N.D.
phage EV219 -0.3 -0.3 -0.1 +0.1 N.D.
phage P1vir -0.1 -0.5 -0.1 +0.1 N.D.
phage Bas48 -0.3 -0.3 +0.1 +0.0 N.D.
phage Bas48 -0.2 -0.5 +0.1 +0.1 N.D.
phage Bas05 -0.2 -0.4 -0.1 +0.3 N.D.
phage Bas22 -0.2 -0.3 -0.0 +0.1 N.D.
phage Bas45 -0.5 -0.3 +0.1 +0.2 N.D.
phage K20 -0.0 -0.1 -0.3 +0.1 N.D.
carbon source L-Rhamnose +0.0 -0.2 +0.2 -0.2 N.D.
phage CEV1 -0.3 -0.3 +0.1 +0.1 N.D.
phage Bas27 +0.1 -0.2 -0.1 +0.2 N.D.
phage CEV1 +0.1 -0.3 +0.1 +0.3 N.D.
no phage control Control_Nissle -0.1 +0.3 -0.1 +0.2 N.D.
phage RB68 +0.2 +0.2 -0.1 +0.2 N.D.
phage Phi92 +0.2 +0.2 +0.1 +0.1 N.D.
phage Bas10 +0.4 +0.1 +0.3 +0.3 N.D.
phage Bas10 +0.7 +0.7 +0.5 +0.7 N.D.
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