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Protein
Homologs
Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS20970 and ECOLIN_RS20975 are separated by 317 nucleotides
ECOLIN_RS20975 and ECOLIN_RS20980 are separated by 38 nucleotides
ECOLIN_RS20980 and ECOLIN_RS20985 are separated by 2 nucleotides
ECOLIN_RS20985 and ECOLIN_RS20990 overlap by 11 nucleotides
ECOLIN_RS20970: ECOLIN_RS20970 - hypothetical protein, at 4,218,112 to 4,219,437
_RS20970
ECOLIN_RS20975: ECOLIN_RS20975 - hypothetical protein, at 4,219,755 to 4,219,952
_RS20975
ECOLIN_RS20980: ECOLIN_RS20980 - hypothetical protein, at 4,219,991 to 4,221,817
_RS20980
ECOLIN_RS20985: ECOLIN_RS20985 - ABC-three component system middle component 2, at 4,221,820 to 4,222,305
_RS20985
ECOLIN_RS20990: ECOLIN_RS20990 - ABC-three component system protein, at 4,222,295 to 4,223,395
_RS20990
Group
Condition
ECOLIN
_RS20970
ECOLIN
_RS20975
ECOLIN
_RS20980
ECOLIN
_RS20985
ECOLIN
_RS20990
carbon source
L-Rhamnose
N.D.
N.D.
-0.1
-0.5
-0.6
phage
Bas04
N.D.
N.D.
-0.4
-0.3
-0.2
phage
EV219
N.D.
N.D.
-0.2
-0.2
-0.3
phage
Bas05
N.D.
N.D.
-0.3
-0.4
+0.1
phage
EV219
N.D.
N.D.
-0.3
-0.0
-0.3
phage
Bas05
N.D.
N.D.
-0.5
-0.1
-0.0
phage
Bas21
N.D.
N.D.
-0.4
-0.0
-0.1
phage
JK16
N.D.
N.D.
-0.3
-0.2
+0.0
carbon source
Sodium-DL-Lactate
N.D.
N.D.
+0.0
-0.3
-0.2
phage
Bas31
N.D.
N.D.
+0.0
-0.3
-0.2
phage
Bas27
N.D.
N.D.
-0.3
-0.1
+0.0
phage
TP7
N.D.
N.D.
-0.4
+0.2
-0.1
phage
P1vir
N.D.
N.D.
+0.1
-0.1
-0.2
phage
Phi92
N.D.
N.D.
+0.1
+0.0
-0.3
phage
Bas04
N.D.
N.D.
-0.2
+0.2
-0.2
carbon source
L-Arabinose
N.D.
N.D.
+0.2
-0.3
+0.0
carbon source
Casamino-acids
N.D.
N.D.
+0.4
-0.1
-0.2
phage
Bas51
N.D.
N.D.
-0.0
-0.2
+0.2
phage
Bas52
N.D.
N.D.
+0.3
-0.1
-0.1
phage
Bas63
N.D.
N.D.
+0.2
-0.2
+0.2
carbon source
L-Arabinose
N.D.
N.D.
+0.0
+0.3
-0.1
phage
K20
N.D.
N.D.
+0.2
+0.3
-0.1
carbon source
Casamino-acids
N.D.
N.D.
+0.4
+0.1
+0.0
phage
RB51
N.D.
N.D.
+0.3
+0.3
+0.0
carbon source
D-Glucose
N.D.
N.D.
+0.7
+0.0
-0.1
phage
Bas48
N.D.
N.D.
+0.3
+0.4
+0.0
phage
Phi92
N.D.
N.D.
+0.4
+0.1
+0.2
phage
RB51
N.D.
N.D.
+0.4
+0.3
+0.2
phage
Bas22
N.D.
N.D.
+0.5
+0.1
+0.3
phage
CEV1
N.D.
N.D.
+0.4
+0.3
+0.3
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