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Protein
Homologs
Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS20850 and ECOLIN_RS20855 are separated by 26 nucleotides
ECOLIN_RS20855 and ECOLIN_RS20860 are separated by 284 nucleotides
ECOLIN_RS20860 and ECOLIN_RS20865 are separated by 9 nucleotides
ECOLIN_RS20865 and ECOLIN_RS20870 are separated by 292 nucleotides
ECOLIN_RS20850: ECOLIN_RS20850 - fructose PTS transporter subunit IIA, at 4,201,303 to 4,201,773
_RS20850
ECOLIN_RS20855: ECOLIN_RS20855 - PRD domain-containing protein, at 4,201,800 to 4,203,353
_RS20855
ECOLIN_RS20860: ECOLIN_RS20860 - alpha-xylosidase, at 4,203,638 to 4,205,956
_RS20860
ECOLIN_RS20865: ECOLIN_RS20865 - glycoside-pentoside-hexuronide family transporter, at 4,205,966 to 4,207,348
_RS20865
ECOLIN_RS20870: ECOLIN_RS20870 - tRNA-Sec, at 4,207,641 to 4,207,735
_RS20870
Group
Condition
ECOLIN
_RS20850
ECOLIN
_RS20855
ECOLIN
_RS20860
ECOLIN
_RS20865
ECOLIN
_RS20870
phage
P1vir
-1.3
-0.2
-0.0
+0.1
N.D.
phage
Bas04
-1.2
+0.0
-0.0
-0.1
N.D.
phage
Bas10
-0.9
-0.1
+0.0
+0.0
N.D.
phage
JK16
-0.9
+0.1
-0.0
-0.1
N.D.
phage
Bas21
-0.7
-0.0
+0.0
-0.1
N.D.
phage
Bas37
-0.9
+0.2
-0.0
+0.0
N.D.
phage
Bas21
-1.0
+0.2
+0.1
-0.1
N.D.
phage
K20
-0.3
-0.3
+0.0
+0.1
N.D.
phage
TP7
-0.4
-0.1
+0.1
+0.0
N.D.
carbon source
L-Arabinose
-0.5
+0.0
-0.1
+0.2
N.D.
carbon source
Casamino-acids
-0.5
+0.3
-0.0
+0.1
N.D.
phage
Bas63
-0.4
+0.3
-0.0
-0.0
N.D.
phage
CEV1
-0.7
+0.4
+0.1
+0.1
N.D.
carbon source
L-Rhamnose
-0.3
+0.6
-0.0
-0.2
N.D.
carbon source
Casamino-acids
-0.3
+0.2
+0.1
+0.1
N.D.
phage
Bas52
+0.6
+0.0
-0.1
-0.2
N.D.
phage
Bas68
+0.7
-0.2
-0.0
-0.1
N.D.
phage
Bas22
+0.4
-0.2
-0.0
+0.2
N.D.
phage
Bas05
+0.4
+0.2
-0.0
-0.1
N.D.
phage
RB68
+0.7
+0.1
-0.0
-0.2
N.D.
phage
Bas44
+0.2
+0.4
+0.1
+0.0
N.D.
phage
RB51
+0.6
-0.0
-0.0
+0.1
N.D.
phage
RB51
+0.4
+0.4
+0.1
-0.0
N.D.
carbon source
L-Rhamnose
+0.1
+0.6
-0.1
+0.2
N.D.
phage
Bas52
+0.8
+0.2
-0.1
-0.0
N.D.
phage
K25
+1.0
-0.0
-0.1
-0.0
N.D.
phage
Bas68
+0.6
+0.2
+0.1
+0.0
N.D.
phage
Bas22
+0.4
+0.4
+0.1
+0.0
N.D.
phage
K20
+0.9
-0.1
+0.1
+0.0
N.D.
phage
Bas48
+1.0
+0.3
-0.0
+0.1
N.D.
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