Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS20770 and ECOLIN_RS20775 overlap by 4 nucleotidesECOLIN_RS20775 and ECOLIN_RS20780 are separated by 257 nucleotidesECOLIN_RS20780 and ECOLIN_RS20785 are separated by 54 nucleotidesECOLIN_RS20785 and ECOLIN_RS20790 are separated by 18 nucleotides ECOLIN_RS20770: ECOLIN_RS20770 - trimeric intracellular cation channel family protein, at 4,183,209 to 4,183,826 _RS20770 ECOLIN_RS20775: ECOLIN_RS20775 - NAD-dependent DNA ligase LigB, at 4,183,823 to 4,185,505 _RS20775 ECOLIN_RS20780: ECOLIN_RS20780 - guanylate kinase, at 4,185,763 to 4,186,386 _RS20780 ECOLIN_RS20785: ECOLIN_RS20785 - DNA-directed RNA polymerase subunit omega, at 4,186,441 to 4,186,716 _RS20785 ECOLIN_RS20790: ECOLIN_RS20790 - bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase, at 4,186,735 to 4,188,843 _RS20790
Group Condition ECOLIN_RS20770 ECOLIN_RS20775 ECOLIN_RS20780 ECOLIN_RS20785 ECOLIN_RS20790
phage CEV1 -0.1 +0.0 N.D. N.D. -3.6
phage K20 -0.0 +0.1 N.D. N.D. -3.2
phage Bas27 -0.1 -0.0 N.D. N.D. -2.9
no phage control Control_Nissle +0.1 -0.1 N.D. N.D. -3.0
phage Bas63 +0.1 -0.0 N.D. N.D. -3.0
no phage control Control_Nissle +0.1 -0.0 N.D. N.D. -2.9
phage K20 +0.1 +0.1 N.D. N.D. -3.0
phage Bas44 -0.1 +0.0 N.D. N.D. -2.7
phage Phi92 +0.1 -0.1 N.D. N.D. -2.7
phage Bas10 +0.0 -0.1 N.D. N.D. -2.5
phage Bas05 -0.0 -0.0 N.D. N.D. -2.3
phage Bas44 -0.2 -0.1 N.D. N.D. -2.0
carbon source Casamino-acids -0.0 -0.1 N.D. N.D. -2.1
carbon source Sodium-DL-Lactate -0.2 -0.1 N.D. N.D. -2.0
phage Bas68 +0.0 +0.1 N.D. N.D. -2.3
phage RB51 +0.0 +0.1 N.D. N.D. -2.1
phage Bas48 +0.1 +0.1 N.D. N.D. -2.2
phage JK16 -0.1 -0.1 N.D. N.D. -1.6
phage Bas04 +0.2 -0.0 N.D. N.D. -1.8
phage Bas52 -0.0 -0.0 N.D. N.D. -1.6
phage JK38 -0.1 -0.0 N.D. N.D. -1.5
phage Bas05 -0.0 +0.0 N.D. N.D. -1.7
carbon source Sodium-DL-Lactate +0.0 -0.1 N.D. N.D. -1.5
phage CEV1 -0.3 +0.0 N.D. N.D. -1.3
phage Bas04 -0.1 -0.1 N.D. N.D. -1.3
carbon source Casamino-acids -0.1 -0.1 N.D. N.D. -1.3
phage Bas52 +0.2 +0.0 N.D. N.D. -1.7
phage Bas51 +0.0 +0.1 N.D. N.D. -1.4
carbon source D-Glucose -0.1 -0.2 N.D. N.D. +2.0
phage Bas45 -0.3 +0.1 N.D. N.D. +2.7
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