Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS20575 and ECOLIN_RS20580 overlap by 4 nucleotidesECOLIN_RS20580 and ECOLIN_RS20585 are separated by 47 nucleotidesECOLIN_RS20585 and ECOLIN_RS20590 are separated by 54 nucleotidesECOLIN_RS20590 and ECOLIN_RS20595 are separated by 79 nucleotides ECOLIN_RS20575: ECOLIN_RS20575 - transcriptional regulator LldR, at 4,146,720 to 4,147,496 _RS20575 ECOLIN_RS20580: ECOLIN_RS20580 - quinone-dependent L-lactate dehydrogenase, at 4,147,493 to 4,148,683 _RS20580 ECOLIN_RS20585: ECOLIN_RS20585 - tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL, at 4,148,731 to 4,149,204 _RS20585 ECOLIN_RS20590: ECOLIN_RS20590 - serine O-acetyltransferase, at 4,149,259 to 4,150,080 _RS20590 ECOLIN_RS20595: ECOLIN_RS20595 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase, at 4,150,160 to 4,151,179 _RS20595
Group Condition ECOLIN_RS20575 ECOLIN_RS20580 ECOLIN_RS20585 ECOLIN_RS20590 ECOLIN_RS20595
carbon source Sodium-DL-Lactate -1.2 -0.5 +0.0 -5.5 N.D.
carbon source D-Glucose +0.2 +0.1 -0.1 -6.0 N.D.
carbon source Sodium-DL-Lactate -1.6 -0.5 +0.3 -4.0 N.D.
phage Bas38 +0.1 -0.0 +0.1 -5.5 N.D.
carbon source L-Arabinose +0.0 -0.0 +0.2 -5.2 N.D.
carbon source D-Glucose -0.3 -0.1 -0.1 -4.0 N.D.
phage TP7 +0.1 +0.1 +0.2 -4.6 N.D.
phage Bas38 +0.1 -0.0 +0.1 -3.1 N.D.
carbon source L-Arabinose -0.1 +0.0 +0.3 -3.0 N.D.
phage Bas44 -0.1 -0.1 +0.0 -1.9 N.D.
phage Phi92 +0.1 -0.2 +0.1 -2.1 N.D.
phage Bas10 +0.1 -0.1 +0.1 -2.2 N.D.
phage Phi92 -0.1 -0.0 +0.1 -2.0 N.D.
phage EV219 +0.2 +0.1 +0.1 -2.3 N.D.
carbon source L-Rhamnose -0.3 -0.8 +0.3 -0.9 N.D.
phage Bas10 -0.0 -0.2 +0.2 -1.7 N.D.
carbon source Casamino-acids +0.1 -0.1 -0.0 -1.7 N.D.
phage P1vir +0.3 +0.1 +0.1 -2.1 N.D.
phage JK38 +0.2 -0.1 -0.0 -1.8 N.D.
phage Bas44 +0.0 -0.1 -0.5 -0.8 N.D.
phage Bas31 +0.1 +0.1 +0.1 -1.6 N.D.
phage Bas45 +0.2 +0.0 -0.1 -1.3 N.D.
phage Bas48 -0.3 -0.1 +0.1 -0.9 N.D.
phage TP7 +0.2 +0.1 -0.0 -1.2 N.D.
phage Bas48 +0.2 -0.0 -0.1 -1.1 N.D.
phage JK16 +0.1 +0.1 +0.1 -1.3 N.D.
phage RB51 +0.2 -0.0 -0.2 -1.0 N.D.
phage RB51 +0.0 -0.0 +0.2 -1.1 N.D.
phage Bas31 +0.2 -0.0 +0.1 -1.2 N.D.
phage Bas37 +0.3 +0.1 +0.1 -1.1 N.D.
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