Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS20565 and ECOLIN_RS20570 are separated by 411 nucleotidesECOLIN_RS20570 and ECOLIN_RS20575 overlap by 1 nucleotidesECOLIN_RS20575 and ECOLIN_RS20580 overlap by 4 nucleotidesECOLIN_RS20580 and ECOLIN_RS20585 are separated by 47 nucleotides ECOLIN_RS20565: ECOLIN_RS20565 - trimeric autotransporter adhesin UpaG, at 4,139,317 to 4,144,653 _RS20565 ECOLIN_RS20570: ECOLIN_RS20570 - L-lactate permease, at 4,145,065 to 4,146,720 _RS20570 ECOLIN_RS20575: ECOLIN_RS20575 - transcriptional regulator LldR, at 4,146,720 to 4,147,496 _RS20575 ECOLIN_RS20580: ECOLIN_RS20580 - quinone-dependent L-lactate dehydrogenase, at 4,147,493 to 4,148,683 _RS20580 ECOLIN_RS20585: ECOLIN_RS20585 - tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL, at 4,148,731 to 4,149,204 _RS20585
Group Condition ECOLIN_RS20565 ECOLIN_RS20570 ECOLIN_RS20575 ECOLIN_RS20580 ECOLIN_RS20585
carbon source Sodium-DL-Lactate -0.0 -1.5 -1.2 -0.5 +0.0
carbon source Sodium-DL-Lactate +0.0 -1.4 -1.6 -0.5 +0.3
carbon source L-Rhamnose -0.0 -0.5 -0.3 -0.8 +0.3
phage Bas44 -0.1 +0.0 +0.0 -0.1 -0.5
carbon source L-Rhamnose -0.0 -0.3 -0.4 -0.0 +0.2
phage Bas63 -0.0 +0.1 -0.1 -0.1 -0.3
phage Bas22 +0.1 -0.1 -0.3 -0.2 +0.1
phage RB68 +0.1 -0.1 -0.2 +0.1 -0.2
carbon source D-Glucose +0.0 +0.2 -0.3 -0.1 -0.1
phage Bas10 -0.0 -0.2 +0.1 -0.1 +0.1
phage Bas10 -0.1 -0.1 -0.0 -0.2 +0.2
phage Bas48 +0.1 -0.1 -0.3 -0.1 +0.1
phage Phi92 +0.1 -0.1 -0.1 -0.0 +0.1
phage Bas52 +0.1 -0.1 -0.2 -0.0 +0.2
phage Phi92 +0.1 -0.1 +0.1 -0.2 +0.1
carbon source L-Arabinose +0.0 -0.1 -0.1 +0.0 +0.3
phage RB51 +0.0 +0.1 +0.2 -0.0 -0.2
no phage control Control_Nissle +0.1 -0.0 -0.1 -0.1 +0.3
phage Bas05 +0.1 -0.2 +0.2 +0.1 +0.1
phage Bas21 +0.1 -0.1 +0.2 -0.0 +0.1
phage JK16 +0.1 -0.1 +0.1 +0.1 +0.1
phage Bas45 -0.1 +0.2 +0.2 +0.0 -0.1
phage Bas05 +0.0 -0.0 +0.2 +0.1 +0.2
phage Bas31 +0.1 +0.1 +0.1 +0.1 +0.1
phage TP7 -0.0 +0.2 +0.1 +0.1 +0.2
phage JK38 +0.1 +0.1 +0.1 +0.1 +0.2
phage Bas04 +0.1 -0.1 +0.2 +0.1 +0.4
phage EV219 +0.0 +0.2 +0.2 +0.1 +0.1
phage P1vir -0.0 +0.3 +0.3 +0.1 +0.1
phage Bas37 +0.1 +0.3 +0.3 +0.1 +0.1
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