Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS20455 and ECOLIN_RS20460 are separated by 113 nucleotidesECOLIN_RS20460 and ECOLIN_RS20465 are separated by 2 nucleotidesECOLIN_RS20465 and ECOLIN_RS20470 are separated by 12 nucleotidesECOLIN_RS20470 and ECOLIN_RS20475 are separated by 3 nucleotides ECOLIN_RS20455: ECOLIN_RS20455 - DUF4862 family protein, at 4,115,109 to 4,116,029 _RS20455 ECOLIN_RS20460: ECOLIN_RS20460 - 2,3-diketo-L-gulonate TRAP transporter small permease YiaM, at 4,116,143 to 4,116,610 _RS20460 ECOLIN_RS20465: ECOLIN_RS20465 - 2,3-diketo-L-gulonate TRAP transporter large permease YiaN, at 4,116,613 to 4,117,890 _RS20465 ECOLIN_RS20470: ECOLIN_RS20470 - 2,3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO, at 4,117,903 to 4,118,889 _RS20470 ECOLIN_RS20475: ECOLIN_RS20475 - L-xylulokinase, at 4,118,893 to 4,120,389 _RS20475
Group Condition ECOLIN_RS20455 ECOLIN_RS20460 ECOLIN_RS20465 ECOLIN_RS20470 ECOLIN_RS20475
no phage control Control_Nissle -0.0 -0.6 -0.1 -0.1 +0.0
phage Bas68 -0.1 -0.5 +0.1 -0.4 +0.1
phage RB51 -0.2 -0.4 -0.0 -0.1 +0.0
phage Bas10 -0.0 -0.4 +0.0 -0.1 -0.1
phage Bas63 +0.1 -0.5 +0.0 -0.1 -0.1
phage K20 -0.1 -0.3 +0.1 -0.2 -0.1
phage Bas52 -0.1 -0.3 -0.1 +0.0 -0.1
carbon source L-Arabinose -0.0 -0.1 -0.1 +0.1 -0.4
phage Bas52 -0.1 -0.1 -0.1 -0.2 +0.0
phage RB68 -0.3 +0.1 +0.1 -0.3 +0.1
phage Bas22 -0.2 +0.1 -0.3 +0.2 -0.1
phage Phi92 +0.3 -0.4 +0.1 -0.2 -0.1
phage Bas27 +0.1 -0.1 +0.0 +0.1 -0.3
phage K20 +0.0 -0.3 +0.2 +0.0 +0.1
phage K25 +0.2 -0.1 +0.0 -0.2 -0.0
phage EV219 +0.1 +0.2 +0.1 -0.3 -0.1
carbon source Casamino-acids +0.1 -0.4 +0.1 +0.2 +0.0
carbon source Casamino-acids -0.2 +0.1 +0.1 +0.3 -0.2
phage CEV1 +0.2 +0.2 +0.0 -0.1 -0.2
phage Bas21 +0.3 -0.0 +0.1 -0.1 -0.1
phage Bas48 -0.2 -0.0 +0.0 +0.1 +0.2
phage JK16 -0.1 +0.1 +0.1 +0.2 -0.2
phage Phi92 +0.1 +0.1 +0.3 -0.1 -0.2
carbon source L-Rhamnose +0.0 -0.2 +0.0 +0.2 +0.2
carbon source D-Glucose +0.1 -0.3 +0.2 +0.1 +0.0
phage EV219 -0.0 +0.4 +0.1 -0.0 -0.1
phage JK38 +0.1 +0.3 +0.0 +0.1 -0.1
phage Bas38 +0.2 -0.0 +0.1 +0.2 +0.0
phage Bas45 -0.3 +0.2 +0.1 +0.2 +0.3
carbon source L-Rhamnose -0.2 +0.3 +0.3 +0.5 +0.0
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