Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS20450 and ECOLIN_RS20455 are separated by 22 nucleotidesECOLIN_RS20455 and ECOLIN_RS20460 are separated by 113 nucleotidesECOLIN_RS20460 and ECOLIN_RS20465 are separated by 2 nucleotidesECOLIN_RS20465 and ECOLIN_RS20470 are separated by 12 nucleotides ECOLIN_RS20450: ECOLIN_RS20450 - YhcH/YjgK/YiaL family protein, at 4,114,622 to 4,115,086 _RS20450 ECOLIN_RS20455: ECOLIN_RS20455 - DUF4862 family protein, at 4,115,109 to 4,116,029 _RS20455 ECOLIN_RS20460: ECOLIN_RS20460 - 2,3-diketo-L-gulonate TRAP transporter small permease YiaM, at 4,116,143 to 4,116,610 _RS20460 ECOLIN_RS20465: ECOLIN_RS20465 - 2,3-diketo-L-gulonate TRAP transporter large permease YiaN, at 4,116,613 to 4,117,890 _RS20465 ECOLIN_RS20470: ECOLIN_RS20470 - 2,3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO, at 4,117,903 to 4,118,889 _RS20470
Group Condition ECOLIN_RS20450 ECOLIN_RS20455 ECOLIN_RS20460 ECOLIN_RS20465 ECOLIN_RS20470
phage RB51 -0.7 -0.2 -0.4 -0.0 -0.1
phage Bas68 -0.3 -0.1 -0.5 +0.1 -0.4
phage Bas10 -0.4 -0.0 -0.4 +0.0 -0.1
phage Bas04 -0.5 -0.1 -0.0 +0.0 -0.2
phage Bas52 -0.1 -0.1 -0.1 -0.1 -0.2
phage Bas22 -0.2 -0.2 -0.2 -0.0 +0.1
phage K20 -0.0 -0.1 -0.3 +0.1 -0.2
phage K25 -0.4 +0.1 -0.2 +0.1 -0.1
phage RB68 -0.1 -0.3 +0.1 +0.1 -0.3
no phage control Control_Nissle +0.3 -0.0 -0.6 -0.1 -0.1
carbon source L-Rhamnose -0.4 +0.0 -0.2 +0.0 +0.2
phage K20 -0.3 +0.0 -0.3 +0.2 +0.0
phage Bas31 -0.2 +0.1 -0.1 -0.1 -0.0
phage Bas63 +0.1 +0.1 -0.5 +0.0 -0.1
phage EV219 -0.4 +0.1 +0.2 +0.1 -0.3
phage JK38 -0.3 +0.0 +0.1 +0.0 -0.1
phage Bas22 -0.1 -0.2 +0.1 -0.3 +0.2
phage Phi92 -0.0 +0.3 -0.4 +0.1 -0.2
phage Bas21 -0.4 +0.3 -0.0 +0.1 -0.1
phage CEV1 -0.4 +0.2 +0.2 +0.0 -0.1
phage Bas21 -0.4 +0.2 +0.2 +0.1 -0.1
phage Phi92 -0.3 +0.1 +0.1 +0.3 -0.1
phage JK16 -0.2 -0.1 +0.1 +0.1 +0.2
carbon source Casamino-acids +0.2 +0.1 -0.4 +0.1 +0.2
carbon source D-Glucose +0.0 +0.1 -0.3 +0.2 +0.1
phage EV219 -0.2 -0.0 +0.4 +0.1 -0.0
phage JK38 -0.2 +0.1 +0.3 +0.0 +0.1
phage Bas63 +0.3 +0.2 +0.1 -0.0 -0.1
phage Bas45 +0.4 -0.3 +0.2 +0.1 +0.2
carbon source L-Rhamnose +0.1 -0.2 +0.3 +0.3 +0.5
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