Fitness for 5 genes in Escherichia coli Nissle 1917

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 62 experiments or choose conditions or try the comparative fitness browser

500 ntECOLIN_RS20420 and ECOLIN_RS20425 are separated by 177 nucleotidesECOLIN_RS20425 and ECOLIN_RS20435 are separated by 151 nucleotidesECOLIN_RS20435 and ECOLIN_RS20440 are separated by 101 nucleotidesECOLIN_RS20440 and ECOLIN_RS20445 are separated by 200 nucleotides ECOLIN_RS20420: ECOLIN_RS20420 - alpha-amylase, at 4,108,375 to 4,110,405 _RS20420 ECOLIN_RS20425: ECOLIN_RS20425 - valine--pyruvate transaminase, at 4,110,583 to 4,111,836 _RS20425 ECOLIN_RS20435: ECOLIN_RS20435 - 4Fe-4S binding protein, at 4,111,988 to 4,112,461 _RS20435 ECOLIN_RS20440: ECOLIN_RS20440 - IclR family transcriptional regulator YiaJ, at 4,112,563 to 4,113,411 _RS20440 ECOLIN_RS20445: ECOLIN_RS20445 - 3-dehydro-L-gulonate 2-dehydrogenase, at 4,113,612 to 4,114,610 _RS20445
Group Condition ECOLIN_RS20420 ECOLIN_RS20425 ECOLIN_RS20435 ECOLIN_RS20440 ECOLIN_RS20445
carbon source D-Glucose -0.1 -0.2 -0.6 -0.2 +0.2
carbon source L-Arabinose -0.1 -0.2 -0.0 -0.4 -0.1
carbon source L-Arabinose -0.1 -0.2 +0.0 -0.3 -0.1
phage Bas68 +0.0 -0.1 -0.1 -0.2 -0.2
carbon source Casamino-acids +0.1 +0.1 -0.4 -0.4 +0.1
carbon source Sodium-DL-Lactate +0.1 +0.0 -0.2 -0.2 +0.1
carbon source Casamino-acids +0.1 +0.1 -0.2 -0.3 +0.1
phage Bas52 -0.0 +0.0 -0.3 +0.2 -0.0
phage RB51 +0.1 +0.0 +0.2 -0.0 -0.3
phage Bas45 -0.3 +0.1 +0.2 +0.1 -0.1
phage Bas22 +0.1 -0.1 +0.3 -0.2 -0.1
phage Bas10 +0.0 -0.1 +0.2 -0.2 +0.1
phage Bas22 +0.1 -0.1 +0.3 +0.0 -0.2
phage Phi92 +0.1 +0.0 +0.1 -0.3 +0.2
phage Phi92 +0.1 -0.1 +0.1 -0.0 +0.2
carbon source L-Rhamnose -0.2 +0.2 +0.1 +0.5 -0.2
phage JK16 +0.1 -0.0 +0.2 -0.1 +0.2
phage P1vir +0.1 +0.3 -0.2 +0.2 -0.0
phage Bas38 +0.2 +0.1 +0.1 +0.1 +0.1
phage Bas05 +0.1 -0.0 +0.2 +0.2 +0.2
phage Bas37 +0.1 +0.1 +0.3 +0.1 +0.1
phage Bas38 +0.2 +0.2 +0.1 +0.1 +0.1
carbon source L-Rhamnose +0.1 +0.6 +0.0 -0.0 -0.0
phage EV219 +0.1 +0.1 +0.3 +0.1 +0.0
phage EV219 +0.0 +0.1 +0.3 +0.4 +0.1
phage Bas37 +0.1 +0.0 +0.3 +0.3 +0.1
phage Bas21 +0.4 -0.1 +0.3 +0.2 +0.1
phage Bas27 +0.2 -0.1 +0.4 +0.2 +0.1
phage Bas21 +0.4 +0.0 +0.3 -0.0 +0.2
phage Bas31 +0.1 +0.1 +0.2 +0.5 +0.1
remove
ECOLIN_RS20420
plot
remove
ECOLIN_RS20425
plot
remove
ECOLIN_RS20435
remove
ECOLIN_RS20440
plot
remove
ECOLIN_RS20445
plot