Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS20380 and ECOLIN_RS20385 are separated by 168 nucleotidesECOLIN_RS20385 and ECOLIN_RS20390 are separated by 71 nucleotidesECOLIN_RS20390 and ECOLIN_RS20395 are separated by 365 nucleotidesECOLIN_RS20395 and ECOLIN_RS20400 are separated by 77 nucleotides ECOLIN_RS20380: ECOLIN_RS20380 - inner membrane protein YiaB, at 4,098,373 to 4,098,714 _RS20380 ECOLIN_RS20385: ECOLIN_RS20385 - xylulokinase, at 4,098,883 to 4,100,337 _RS20385 ECOLIN_RS20390: ECOLIN_RS20390 - xylose isomerase, at 4,100,409 to 4,101,731 _RS20390 ECOLIN_RS20395: ECOLIN_RS20395 - D-xylose ABC transporter substrate-binding protein, at 4,102,097 to 4,103,089 _RS20395 ECOLIN_RS20400: ECOLIN_RS20400 - D-xylose ABC transporter ATP-binding protein, at 4,103,167 to 4,104,708 _RS20400
Group Condition ECOLIN_RS20380 ECOLIN_RS20385 ECOLIN_RS20390 ECOLIN_RS20395 ECOLIN_RS20400
phage Phi92 -0.3 -0.1 -0.1 -0.3 -0.0
phage Bas44 +0.1 +0.1 -0.0 -0.3 -0.3
phage P1vir -0.4 +0.1 -0.3 +0.5 -0.2
phage TP7 -0.2 +0.0 -0.1 +0.2 -0.3
phage CEV1 -0.3 +0.1 -0.1 +0.2 -0.3
phage Bas48 -0.3 -0.1 +0.0 +0.2 -0.1
phage Bas22 +0.1 +0.1 -0.2 +0.1 -0.2
carbon source L-Arabinose -0.2 +0.1 -0.0 +0.2 -0.2
phage Bas31 -0.3 +0.0 +0.1 -0.2 +0.2
phage JK16 -0.4 -0.0 -0.1 +0.3 +0.1
phage RB51 -0.2 +0.2 -0.1 +0.3 -0.3
phage Bas37 -0.3 +0.1 -0.0 +0.1 -0.1
phage Bas27 -0.4 +0.0 +0.0 +0.2 +0.1
no phage control Control_Nissle -0.2 +0.0 +0.2 +0.1 -0.2
phage Bas04 -0.2 +0.0 -0.0 +0.3 -0.1
phage Bas10 -0.1 -0.2 +0.0 +0.3 -0.1
phage Bas44 +0.3 +0.1 +0.0 -0.2 -0.2
phage Bas38 -0.3 +0.1 -0.1 +0.2 +0.1
phage K20 +0.2 +0.0 +0.1 +0.1 -0.2
phage Bas27 -0.3 +0.0 -0.0 +0.5 +0.1
phage JK16 +0.1 -0.2 -0.0 +0.2 +0.2
phage Bas45 +0.3 +0.4 +0.0 -0.2 -0.2
phage Bas05 -0.2 +0.1 -0.1 +0.2 +0.3
phage Bas52 +0.4 -0.1 -0.1 +0.1 -0.0
phage TP7 -0.1 +0.2 -0.1 +0.3 +0.0
phage EV219 -0.1 +0.0 -0.1 +0.4 +0.2
carbon source L-Rhamnose -0.7 +0.3 +0.1 +0.6 +0.3
phage Bas31 +0.3 -0.1 -0.0 +0.1 +0.3
carbon source L-Rhamnose +0.8 -0.1 +0.1 -0.2 +0.1
phage JK38 -0.0 +0.1 +0.1 +0.5 +0.2
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