Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS20120 and ECOLIN_RS20125 are separated by 210 nucleotidesECOLIN_RS20125 and ECOLIN_RS20130 are separated by 404 nucleotidesECOLIN_RS20130 and ECOLIN_RS20135 are separated by 50 nucleotidesECOLIN_RS20135 and ECOLIN_RS20140 are separated by 519 nucleotides ECOLIN_RS20120: ECOLIN_RS20120 - glutamate decarboxylase, at 4,038,257 to 4,039,657 _RS20120 ECOLIN_RS20125: ECOLIN_RS20125 - cytochrome c peroxidase, at 4,039,868 to 4,041,265 _RS20125 ECOLIN_RS20130: ECOLIN_RS20130 - alpha,alpha-trehalase, at 4,041,670 to 4,043,319 _RS20130 ECOLIN_RS20135: ECOLIN_RS20135 - response regulator transcription factor, at 4,043,370 to 4,043,972 _RS20135 ECOLIN_RS20140: ECOLIN_RS20140 - LysR family transcriptional regulator, at 4,044,492 to 4,045,391 _RS20140
Group Condition ECOLIN_RS20120 ECOLIN_RS20125 ECOLIN_RS20130 ECOLIN_RS20135 ECOLIN_RS20140
phage EV219 N.D. -0.0 -0.1 -0.3 -0.0
phage Bas68 N.D. -0.1 -0.0 -0.1 +0.1
phage RB68 N.D. +0.1 +0.1 -0.2 -0.0
phage Bas05 N.D. -0.1 +0.2 +0.0 -0.1
phage K20 N.D. +0.1 +0.1 +0.0 -0.2
phage Bas52 N.D. -0.1 -0.1 -0.1 +0.2
phage Bas21 N.D. +0.0 +0.1 -0.2 +0.1
phage Bas31 N.D. +0.1 +0.1 -0.1 +0.1
carbon source L-Rhamnose N.D. -0.1 +0.2 +0.2 -0.1
phage CEV1 N.D. +0.1 +0.2 -0.1 -0.1
phage TP7 N.D. +0.1 +0.0 -0.1 +0.1
phage Phi92 N.D. +0.1 +0.1 -0.1 +0.0
no phage control Control_Nissle N.D. -0.1 -0.1 +0.1 +0.2
phage JK38 N.D. +0.0 +0.0 -0.1 +0.2
phage CEV1 N.D. +0.1 +0.1 -0.1 +0.1
phage TP7 N.D. -0.1 +0.1 -0.1 +0.3
phage Bas05 N.D. +0.0 +0.1 -0.1 +0.2
phage JK38 N.D. +0.1 +0.1 -0.1 +0.1
carbon source L-Rhamnose N.D. +0.2 +0.1 +0.4 -0.4
carbon source D-Glucose N.D. +0.1 +0.0 +0.1 +0.1
carbon source L-Arabinose N.D. +0.1 +0.0 +0.1 +0.2
phage Bas38 N.D. +0.2 +0.2 -0.1 +0.1
carbon source Casamino-acids N.D. +0.2 +0.1 +0.1 -0.0
carbon source L-Arabinose N.D. +0.1 +0.2 -0.0 +0.1
phage Bas38 N.D. +0.1 +0.2 +0.0 +0.1
phage Bas45 N.D. +0.0 +0.2 -0.1 +0.4
phage Bas27 N.D. +0.1 +0.1 +0.1 +0.1
phage Bas37 N.D. +0.1 +0.2 +0.1 +0.1
phage Bas37 N.D. +0.1 +0.1 +0.1 +0.2
carbon source D-Glucose N.D. +0.1 +0.3 +0.0 +0.2
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