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Protein
Homologs
Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS19960 and ECOLIN_RS19965 are separated by 70 nucleotides
ECOLIN_RS19965 and ECOLIN_RS19970 are separated by 390 nucleotides
ECOLIN_RS19970 and ECOLIN_RS33055 are separated by 113 nucleotides
ECOLIN_RS33055 and ECOLIN_RS19975 are separated by 165 nucleotides
ECOLIN_RS19960: ECOLIN_RS19960 - inorganic phosphate transporter PitA, at 4,005,106 to 4,006,605
_RS19960
ECOLIN_RS19965: ECOLIN_RS19965 - universal stress protein UspB, at 4,006,676 to 4,007,011
_RS19965
ECOLIN_RS19970: ECOLIN_RS19970 - universal stress protein UspA, at 4,007,402 to 4,007,836
_RS19970
ECOLIN_RS33055: ECOLIN_RS33055 - hypothetical protein, at 4,007,950 to 4,007,987
_RS33055
ECOLIN_RS19975: ECOLIN_RS19975 - dipeptide/tripeptide permease DtpB, at 4,008,153 to 4,009,622
_RS19975
Group
Condition
ECOLIN
_RS19960
ECOLIN
_RS19965
ECOLIN
_RS19970
ECOLIN
_RS33055
ECOLIN
_RS19975
phage
TP7
-7.7
-0.3
-0.4
-0.2
+0.6
phage
EV219
-6.7
-0.3
-0.1
-0.2
+0.3
phage
EV219
-5.6
-0.3
-0.0
+0.0
+0.1
phage
Bas38
-5.1
-0.1
-0.4
+0.3
-0.4
phage
Bas31
-5.4
+0.1
-0.4
+0.1
+0.1
phage
Bas31
-5.7
+0.0
+0.1
+0.2
+0.2
phage
TP7
-4.3
-0.1
-0.5
+0.1
+0.3
phage
Bas37
-4.5
+0.3
-0.4
-0.1
+0.2
phage
JK38
-4.5
-0.1
-0.1
-0.0
+0.3
phage
JK38
-5.0
+0.0
+0.1
+0.1
+0.2
phage
Bas27
-4.2
-0.1
+0.1
+0.0
+0.1
phage
Bas45
-3.6
-0.3
-0.2
-0.2
+0.5
phage
Bas27
-3.3
-0.1
-0.3
+0.3
-0.1
phage
Bas21
-3.8
+0.0
-0.2
-0.2
+0.8
phage
CEV1
-3.5
-0.2
+0.3
+0.2
+0.0
phage
Bas37
-3.6
+0.2
-0.1
-0.0
+0.4
phage
Bas22
-3.2
+0.0
+0.0
-0.2
+0.3
phage
Bas22
-2.3
-0.1
-0.1
-0.5
-0.0
phage
Bas38
-2.6
-0.0
-0.2
+0.3
-0.4
phage
JK16
-2.0
-0.1
-0.0
-0.2
-0.1
phage
Bas21
-3.0
+0.0
-0.1
-0.1
+0.8
phage
Bas05
-2.0
-0.0
-0.1
-0.1
-0.0
phage
CEV1
-1.9
-0.1
+0.2
+0.2
-0.1
phage
Bas10
-1.7
+0.0
-0.1
+0.3
-0.1
phage
Bas10
-1.2
-0.2
-0.1
+0.4
-0.2
phage
Bas48
-1.4
+0.0
+0.4
-0.1
-0.2
carbon source
D-Glucose
+3.5
-0.1
-0.5
-0.1
-0.1
carbon source
D-Glucose
+2.9
-0.1
-0.1
+0.3
-0.1
carbon source
L-Arabinose
+3.3
-0.0
+0.3
-0.1
+0.0
carbon source
L-Arabinose
+3.8
+0.1
+0.0
-0.0
+0.2
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ECOLIN_RS19970
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