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Protein
Homologs
Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS19945 and ECOLIN_RS33050 are separated by 62 nucleotides
ECOLIN_RS33050 and ECOLIN_RS19950 are separated by 557 nucleotides
ECOLIN_RS19950 and ECOLIN_RS19955 are separated by 86 nucleotides
ECOLIN_RS19955 and ECOLIN_RS19960 are separated by 231 nucleotides
ECOLIN_RS19945: ECOLIN_RS19945 - HlyD family secretion protein, at 4,000,741 to 4,001,808
_RS19945
ECOLIN_RS33050: ECOLIN_RS33050 - protein YhiY, at 4,001,871 to 4,001,984
_RS33050
ECOLIN_RS19950: ECOLIN_RS19950 - DUF2776 family protein, at 4,002,542 to 4,003,594
_RS19950
ECOLIN_RS19955: ECOLIN_RS19955 - NAD(P)/FAD-dependent oxidoreductase, at 4,003,681 to 4,004,874
_RS19955
ECOLIN_RS19960: ECOLIN_RS19960 - inorganic phosphate transporter PitA, at 4,005,106 to 4,006,605
_RS19960
Group
Condition
ECOLIN
_RS19945
ECOLIN
_RS33050
ECOLIN
_RS19950
ECOLIN
_RS19955
ECOLIN
_RS19960
phage
TP7
-0.1
-0.3
+0.0
+0.0
-7.7
phage
EV219
-0.2
+0.3
-0.3
-0.1
-6.7
phage
Bas31
+0.1
-0.3
-0.1
+0.1
-5.7
phage
EV219
+0.0
+0.1
-0.2
+0.0
-5.6
phage
JK38
+0.2
-0.4
-0.3
-0.0
-5.0
phage
Bas31
+0.2
+0.0
+0.0
-0.1
-5.4
phage
Bas38
-0.1
+0.1
-0.1
-0.0
-5.1
phage
Bas27
-0.3
+0.0
-0.0
-0.3
-4.2
phage
Bas37
+0.0
-0.1
-0.1
+0.0
-4.5
phage
JK38
+0.1
+0.1
-0.2
-0.1
-4.5
phage
TP7
+0.1
+0.1
-0.1
-0.0
-4.3
phage
Bas21
+0.0
-0.1
-0.2
-0.1
-3.8
phage
CEV1
-0.1
-0.1
+0.0
-0.3
-3.5
phage
Bas37
+0.1
-0.2
+0.0
+0.0
-3.6
phage
Bas21
-0.1
-0.0
-0.3
-0.1
-3.0
phage
Bas45
+0.1
-0.1
+0.1
+0.1
-3.6
phage
Bas22
+0.1
-0.1
-0.2
-0.1
-3.2
phage
Bas27
+0.1
+0.1
-0.0
+0.1
-3.3
phage
Bas38
+0.2
-0.1
-0.1
+0.1
-2.6
phage
Bas22
+0.1
-0.2
+0.2
-0.2
-2.3
phage
JK16
+0.0
-0.1
-0.1
-0.1
-2.0
phage
Bas05
-0.0
+0.1
-0.1
-0.0
-2.0
phage
CEV1
+0.1
+0.0
-0.1
-0.0
-1.9
phage
RB51
+0.1
-0.6
+0.0
+0.1
-1.4
phage
Bas10
+0.0
-0.1
+0.1
+0.2
-1.7
carbon source
L-Rhamnose
+0.8
+0.4
+0.2
-0.2
-0.6
carbon source
L-Arabinose
-0.1
+0.4
+0.0
-0.0
+3.3
carbon source
D-Glucose
+0.1
+0.3
+0.1
+0.3
+2.9
carbon source
D-Glucose
+0.1
+0.4
+0.2
-0.0
+3.5
carbon source
L-Arabinose
-0.0
+0.6
+0.2
+0.1
+3.8
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