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Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS19840 and ECOLIN_RS19845 are separated by 220 nucleotides
ECOLIN_RS19845 and ECOLIN_RS19850 are separated by 72 nucleotides
ECOLIN_RS19850 and ECOLIN_RS19855 are separated by 3 nucleotides
ECOLIN_RS19855 and ECOLIN_RS19860 are separated by 98 nucleotides
ECOLIN_RS19840: ECOLIN_RS19840 - sulfurtransferase TusA, at 3,980,738 to 3,980,983
_RS19840
ECOLIN_RS19845: ECOLIN_RS19845 - 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter, at 3,981,204 to 3,981,869
_RS19845
ECOLIN_RS19850: ECOLIN_RS19850 - phage sensitivity protein DcrB, at 3,981,942 to 3,982,499
_RS19850
ECOLIN_RS19855: ECOLIN_RS19855 - MFS transporter, at 3,982,503 to 3,983,753
_RS19855
ECOLIN_RS19860: ECOLIN_RS19860 - AI-2E family transporter, at 3,983,852 to 3,984,901
_RS19860
Group
Condition
ECOLIN
_RS19840
ECOLIN
_RS19845
ECOLIN
_RS19850
ECOLIN
_RS19855
ECOLIN
_RS19860
phage
K20
N.D.
-0.2
-0.1
N.D.
-0.5
phage
CEV1
N.D.
-0.2
-0.4
N.D.
-0.2
phage
RB51
N.D.
-0.3
-0.2
N.D.
-0.2
phage
Bas44
N.D.
-0.4
-0.1
N.D.
-0.1
carbon source
L-Arabinose
N.D.
-0.1
-0.2
N.D.
-0.3
phage
Bas63
N.D.
-0.0
-0.1
N.D.
-0.3
phage
Bas52
N.D.
+0.1
-0.2
N.D.
-0.4
phage
RB68
N.D.
-0.2
-0.2
N.D.
-0.1
phage
Bas10
N.D.
-0.2
-0.3
N.D.
-0.0
phage
Bas68
N.D.
-0.2
-0.3
N.D.
+0.0
phage
EV219
N.D.
-0.1
-0.2
N.D.
-0.1
phage
CEV1
N.D.
-0.1
-0.4
N.D.
+0.1
phage
Bas52
N.D.
-0.2
-0.1
N.D.
-0.1
phage
Bas10
N.D.
+0.1
-0.4
N.D.
-0.0
phage
Bas31
N.D.
-0.2
-0.2
N.D.
+0.1
phage
Phi92
N.D.
-0.1
-0.4
N.D.
+0.1
phage
Bas45
N.D.
-0.4
+0.3
N.D.
-0.2
phage
Phi92
N.D.
+0.0
-0.3
N.D.
+0.0
phage
EV219
N.D.
-0.1
+0.2
N.D.
-0.2
phage
K25
N.D.
-0.1
+0.2
N.D.
-0.1
phage
JK16
N.D.
-0.2
+0.3
N.D.
-0.1
phage
Bas22
N.D.
-0.2
+0.7
N.D.
-0.3
phage
Bas04
N.D.
-0.2
+0.3
N.D.
+0.2
carbon source
L-Rhamnose
N.D.
-0.3
+0.6
N.D.
-0.1
phage
K20
N.D.
-0.1
+0.3
N.D.
+0.1
carbon source
Casamino-acids
N.D.
-0.1
+0.1
N.D.
+0.3
carbon source
L-Rhamnose
N.D.
+0.2
+0.2
N.D.
+0.2
phage
Bas22
N.D.
+0.1
+0.8
N.D.
-0.2
phage
Bas21
N.D.
-0.2
+2.2
N.D.
-0.2
phage
Bas21
N.D.
+0.1
+2.4
N.D.
-0.2
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