Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS19530 and ECOLIN_RS19535 are separated by 188 nucleotidesECOLIN_RS19535 and ECOLIN_RS19540 overlap by 19 nucleotidesECOLIN_RS19540 and ECOLIN_RS19545 are separated by 16 nucleotidesECOLIN_RS19545 and ECOLIN_RS19550 are separated by 44 nucleotides ECOLIN_RS19530: ECOLIN_RS19530 - RNA-splicing ligase RtcB, at 3,912,863 to 3,914,089 _RS19530 ECOLIN_RS19535: ECOLIN_RS19535 - DNA-binding transcriptional regulator RtcR, at 3,914,278 to 3,915,876 _RS19535 ECOLIN_RS19540: ECOLIN_RS19540 - DeoR/GlpR family transcriptional regulator, at 3,915,858 to 3,916,616 _RS19540 ECOLIN_RS19545: ECOLIN_RS19545 - rhomboid family intramembrane serine protease GlpG, at 3,916,633 to 3,917,463 _RS19545 ECOLIN_RS19550: ECOLIN_RS19550 - thiosulfate sulfurtransferase GlpE, at 3,917,508 to 3,917,834 _RS19550
Group Condition ECOLIN_RS19530 ECOLIN_RS19535 ECOLIN_RS19540 ECOLIN_RS19545 ECOLIN_RS19550
phage K20 +0.1 -0.6 N.D. N.D. N.D.
carbon source D-Glucose -0.2 -0.2 N.D. N.D. N.D.
phage JK16 +0.1 -0.5 N.D. N.D. N.D.
carbon source L-Rhamnose -0.0 -0.3 N.D. N.D. N.D.
phage Bas48 +0.1 -0.5 N.D. N.D. N.D.
phage Phi92 +0.1 -0.4 N.D. N.D. N.D.
phage Bas21 +0.1 -0.4 N.D. N.D. N.D.
phage Bas22 -0.0 -0.3 N.D. N.D. N.D.
carbon source L-Arabinose -0.1 -0.2 N.D. N.D. N.D.
carbon source Sodium-DL-Lactate -0.1 -0.2 N.D. N.D. N.D.
phage Bas45 +0.1 -0.3 N.D. N.D. N.D.
carbon source D-Glucose +0.0 -0.2 N.D. N.D. N.D.
phage K25 +0.1 -0.2 N.D. N.D. N.D.
phage Bas22 +0.1 -0.2 N.D. N.D. N.D.
phage Bas68 +0.1 -0.3 N.D. N.D. N.D.
phage JK38 +0.1 -0.2 N.D. N.D. N.D.
phage Bas63 +0.1 -0.2 N.D. N.D. N.D.
phage Bas05 +0.2 -0.2 N.D. N.D. N.D.
phage Bas63 +0.2 -0.2 N.D. N.D. N.D.
no phage control Control_Nissle +0.2 -0.2 N.D. N.D. N.D.
no phage control Control_Nissle +0.3 -0.3 N.D. N.D. N.D.
phage Bas31 +0.2 -0.1 N.D. N.D. N.D.
phage RB51 -0.1 +0.2 N.D. N.D. N.D.
phage K25 +0.2 +0.1 N.D. N.D. N.D.
phage Bas48 +0.2 +0.1 N.D. N.D. N.D.
carbon source L-Arabinose -0.0 +0.3 N.D. N.D. N.D.
phage Bas51 +0.2 +0.1 N.D. N.D. N.D.
phage CEV1 -0.0 +0.5 N.D. N.D. N.D.
carbon source Casamino-acids +0.0 +0.5 N.D. N.D. N.D.
carbon source L-Rhamnose +0.2 +0.5 N.D. N.D. N.D.
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