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Protein
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Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS19485 and ECOLIN_RS19490 are separated by 28 nucleotides
ECOLIN_RS19490 and ECOLIN_RS19495 are separated by 37 nucleotides
ECOLIN_RS19495 and ECOLIN_RS19500 are separated by 58 nucleotides
ECOLIN_RS19500 and ECOLIN_RS19505 are separated by 363 nucleotides
ECOLIN_RS19485: ECOLIN_RS19485 - Rpn family recombination-promoting nuclease/putative transposase, at 3,899,447 to 3,900,040
_RS19485
ECOLIN_RS19490: ECOLIN_RS19490 - pimeloyl-ACP methyl ester esterase BioH, at 3,900,069 to 3,900,839
_RS19490
ECOLIN_RS19495: ECOLIN_RS19495 - DNA utilization protein GntX, at 3,900,877 to 3,901,560
_RS19495
ECOLIN_RS19500: ECOLIN_RS19500 - Fe-S biogenesis protein NfuA, at 3,901,619 to 3,902,194
_RS19500
ECOLIN_RS19505: ECOLIN_RS19505 - gluconate transporter, at 3,902,558 to 3,903,874
_RS19505
Group
Condition
ECOLIN
_RS19485
ECOLIN
_RS19490
ECOLIN
_RS19495
ECOLIN
_RS19500
ECOLIN
_RS19505
phage
TP7
+0.1
+0.3
+0.0
-4.3
+0.1
phage
TP7
-0.0
+0.3
+0.0
-3.9
-0.0
phage
Bas21
-0.2
+0.4
-0.4
-3.3
-0.1
phage
Bas21
-0.1
+0.2
-0.2
-3.4
+0.0
phage
Bas22
-0.2
+0.1
+0.2
-3.6
+0.0
phage
JK38
-0.1
+0.3
+0.0
-3.4
-0.2
phage
Bas37
-0.0
+0.1
-0.3
-3.2
-0.1
phage
EV219
-0.0
+0.3
+0.1
-3.2
-0.2
phage
EV219
+0.1
+0.5
-0.1
-3.8
+0.2
phage
CEV1
+0.0
+0.1
-0.1
-2.6
-0.4
phage
Bas45
-0.0
+0.2
-0.1
-3.1
+0.1
phage
Bas37
+0.0
+0.3
-0.3
-2.8
-0.0
phage
Bas31
-0.1
+0.2
-0.1
-2.8
-0.0
phage
Bas22
-0.1
+0.2
-0.1
-2.5
-0.3
phage
Bas31
-0.0
+0.4
-0.1
-3.0
+0.1
phage
JK38
-0.2
+0.2
+0.1
-2.8
+0.0
phage
Bas27
-0.3
+0.2
-0.0
-2.1
-0.1
carbon source
Casamino-acids
-0.0
-0.3
+0.1
-1.7
+0.1
phage
Bas38
+0.0
+0.4
+0.0
-2.6
+0.3
carbon source
Casamino-acids
-0.0
-0.3
-0.2
-1.5
+0.2
phage
Bas27
-0.1
+0.2
+0.2
-2.0
+0.0
phage
JK16
-0.2
+0.0
-0.4
-1.2
+0.1
phage
Bas38
+0.0
+0.2
-0.0
-1.8
-0.0
phage
Bas10
-0.1
+0.0
-0.4
-1.1
+0.1
phage
JK16
-0.1
+0.1
-0.1
-1.2
-0.2
carbon source
D-Glucose
-0.0
-0.1
+0.1
-1.3
+0.1
phage
Bas05
+0.1
+0.2
-0.2
-1.4
+0.0
phage
Bas52
-0.2
-0.1
-0.2
-0.8
+0.2
carbon source
L-Arabinose
+0.1
-0.1
-0.0
-1.3
+0.1
carbon source
L-Rhamnose
+0.0
-0.1
+0.3
+0.9
+0.4
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