Fitness for 5 genes in Escherichia coli Nissle 1917

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 62 experiments or choose conditions or try the comparative fitness browser

500 ntECOLIN_RS19335 and ECOLIN_RS19340 overlap by 8 nucleotidesECOLIN_RS19340 and ECOLIN_RS19345 overlap by 8 nucleotidesECOLIN_RS19345 and ECOLIN_RS19350 are separated by 17 nucleotidesECOLIN_RS19350 and ECOLIN_RS19355 are separated by 106 nucleotides ECOLIN_RS19335: ECOLIN_RS19335 - tryptophan--tRNA ligase, at 3,868,073 to 3,869,077 _RS19335 ECOLIN_RS19340: ECOLIN_RS19340 - phosphoglycolate phosphatase, at 3,869,070 to 3,869,828 _RS19340 ECOLIN_RS19345: ECOLIN_RS19345 - ribulose-phosphate 3-epimerase, at 3,869,821 to 3,870,498 _RS19345 ECOLIN_RS19350: ECOLIN_RS19350 - adenine-specific DNA-methyltransferase, at 3,870,516 to 3,871,352 _RS19350 ECOLIN_RS19355: ECOLIN_RS19355 - cell division protein DamX, at 3,871,459 to 3,872,745 _RS19355
Group Condition ECOLIN_RS19335 ECOLIN_RS19340 ECOLIN_RS19345 ECOLIN_RS19350 ECOLIN_RS19355
phage TP7 N.D. +0.0 -1.1 -5.4 -1.0
carbon source Sodium-DL-Lactate N.D. -0.3 -3.8 -3.0 -0.2
phage JK38 N.D. -0.1 -0.7 -5.5 -0.8
phage Bas44 N.D. +0.1 -3.2 -3.2 -0.5
phage Bas48 N.D. +0.1 -2.4 -3.5 -0.4
carbon source Sodium-DL-Lactate N.D. -0.2 -2.5 -3.0 -0.3
carbon source L-Rhamnose N.D. -0.4 -1.9 -3.8 +0.0
carbon source L-Rhamnose N.D. -0.8 -2.2 -2.8 -0.2
carbon source Casamino-acids N.D. -0.6 -0.7 -4.2 -0.2
phage Bas45 N.D. +0.2 -0.6 -3.6 -1.5
phage Bas44 N.D. +0.2 -2.1 -2.8 -0.6
phage Bas37 N.D. +0.1 -1.3 -3.5 -0.3
phage RB51 N.D. +0.1 -2.1 -2.8 -0.2
phage Bas31 N.D. +0.1 -1.3 -3.3 -0.5
phage Bas10 N.D. -0.1 -1.9 -2.3 -0.6
carbon source L-Arabinose N.D. +0.0 -3.6 -1.4 +0.1
phage Bas21 N.D. +0.0 -1.2 -3.6 +0.1
phage CEV1 N.D. -0.0 -1.1 -2.6 -0.7
phage K20 N.D. +0.3 -2.3 -2.1 -0.4
phage JK16 N.D. -0.0 -1.0 -3.0 -0.3
phage CEV1 N.D. -0.3 -0.5 -2.9 -0.7
phage Bas10 N.D. -0.1 -0.9 -2.6 -0.6
phage Bas22 N.D. +0.1 -1.1 -3.1 -0.1
no phage control Control_Nissle N.D. +0.5 -2.5 -1.6 -0.5
phage EV219 N.D. +0.1 -0.8 -3.2 -0.2
carbon source L-Arabinose N.D. +0.1 -2.1 -2.2 +0.2
phage Bas05 N.D. +0.1 -0.8 -2.8 -0.5
phage K20 N.D. +0.2 -2.3 -1.4 -0.2
phage Bas38 N.D. -0.3 +0.8 -3.1 +0.3
phage Bas38 N.D. -0.2 +0.6 -2.9 +0.3
remove
ECOLIN_RS19335
plot
remove
ECOLIN_RS19340
plot
remove
ECOLIN_RS19345
remove
ECOLIN_RS19350
plot
remove
ECOLIN_RS19355
plot