Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS19325 and ECOLIN_RS19330 are separated by 16 nucleotidesECOLIN_RS19330 and ECOLIN_RS19335 are separated by 154 nucleotidesECOLIN_RS19335 and ECOLIN_RS19340 overlap by 8 nucleotidesECOLIN_RS19340 and ECOLIN_RS19345 overlap by 8 nucleotides ECOLIN_RS19325: ECOLIN_RS19325 - hypothetical protein, at 3,866,628 to 3,866,990 _RS19325 ECOLIN_RS19330: ECOLIN_RS19330 - GntR family transcriptional regulator YhfZ, at 3,867,007 to 3,867,918 _RS19330 ECOLIN_RS19335: ECOLIN_RS19335 - tryptophan--tRNA ligase, at 3,868,073 to 3,869,077 _RS19335 ECOLIN_RS19340: ECOLIN_RS19340 - phosphoglycolate phosphatase, at 3,869,070 to 3,869,828 _RS19340 ECOLIN_RS19345: ECOLIN_RS19345 - ribulose-phosphate 3-epimerase, at 3,869,821 to 3,870,498 _RS19345
Group Condition ECOLIN_RS19325 ECOLIN_RS19330 ECOLIN_RS19335 ECOLIN_RS19340 ECOLIN_RS19345
carbon source Sodium-DL-Lactate -0.0 -0.1 N.D. -0.3 -3.8
carbon source L-Arabinose +0.0 +0.0 N.D. +0.0 -3.6
phage Bas44 +0.0 +0.0 N.D. +0.1 -3.2
carbon source L-Rhamnose +0.1 -0.0 N.D. -0.8 -2.2
carbon source Sodium-DL-Lactate +0.1 -0.0 N.D. -0.2 -2.5
carbon source L-Rhamnose +0.2 -0.3 N.D. -0.4 -1.9
carbon source L-Arabinose -0.1 -0.0 N.D. +0.1 -2.1
phage JK16 -0.4 -0.1 N.D. -0.2 -1.3
phage Bas44 +0.0 -0.1 N.D. +0.2 -2.1
phage K20 -0.2 +0.2 N.D. +0.3 -2.3
phage Bas48 +0.1 +0.2 N.D. +0.1 -2.4
phage Bas10 -0.1 +0.2 N.D. -0.1 -1.9
carbon source Casamino-acids -0.5 -0.2 N.D. -0.6 -0.7
phage K20 +0.0 +0.3 N.D. +0.2 -2.3
no phage control Control_Nissle -0.0 +0.3 N.D. +0.5 -2.5
phage RB51 +0.1 +0.2 N.D. +0.1 -2.1
phage Phi92 -0.4 +0.0 N.D. -0.0 -1.2
phage Bas27 -0.2 -0.0 N.D. +0.0 -1.4
phage TP7 -0.3 +0.1 N.D. +0.0 -1.1
phage Bas37 -0.1 +0.1 N.D. +0.1 -1.3
phage Bas68 +0.1 +0.0 N.D. +0.1 -1.3
phage Bas05 -0.1 +0.6 N.D. +0.0 -1.5
phage CEV1 -0.2 +0.5 N.D. -0.0 -1.1
phage Bas21 -0.2 +0.5 N.D. +0.0 -1.2
phage Bas04 -0.1 +0.4 N.D. +0.2 -1.1
phage Bas31 -0.2 +0.8 N.D. +0.1 -1.3
phage Bas04 -0.2 +0.6 N.D. -0.0 -0.8
phage Bas51 +0.2 +0.6 N.D. +0.1 -1.2
carbon source D-Glucose -0.3 -0.3 N.D. -0.3 +0.9
carbon source D-Glucose -0.1 -0.0 N.D. +0.3 +2.1
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