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Protein
Homologs
Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS19255 and ECOLIN_RS19260 are separated by 104 nucleotides
ECOLIN_RS19260 and ECOLIN_RS19265 are separated by 270 nucleotides
ECOLIN_RS19265 and ECOLIN_RS19270 are separated by 261 nucleotides
ECOLIN_RS19270 and ECOLIN_RS19275 overlap by 4 nucleotides
ECOLIN_RS19255: ECOLIN_RS19255 - YhfG family protein, at 3,852,227 to 3,852,394
_RS19255
ECOLIN_RS19260: ECOLIN_RS19260 - peptidylprolyl isomerase A, at 3,852,499 to 3,853,071
_RS19260
ECOLIN_RS19265: ECOLIN_RS19265 - MFS transporter TsgA, at 3,853,342 to 3,854,523
_RS19265
ECOLIN_RS19270: ECOLIN_RS19270 - NADPH-nitrite reductase large subunit, at 3,854,785 to 3,857,328
_RS19270
ECOLIN_RS19275: ECOLIN_RS19275 - nitrite reductase small subunit NirD, at 3,857,325 to 3,857,651
_RS19275
Group
Condition
ECOLIN
_RS19255
ECOLIN
_RS19260
ECOLIN
_RS19265
ECOLIN
_RS19270
ECOLIN
_RS19275
carbon source
L-Rhamnose
-0.7
-0.4
+0.0
-0.0
-2.2
phage
Bas10
-1.1
-0.3
-0.2
-0.1
+0.4
phage
Bas21
-0.7
-0.4
-0.3
-0.0
+0.2
phage
TP7
-0.4
-0.5
-0.1
-0.0
-0.2
phage
Bas45
-0.3
-1.3
+0.0
+0.3
+0.3
phage
Bas04
-1.2
-0.2
-0.1
+0.0
+0.4
phage
CEV1
-1.0
-0.0
-0.2
-0.1
+0.2
phage
Bas31
-1.0
-0.2
-0.2
-0.0
+0.5
phage
Bas48
-0.6
-0.4
-0.1
+0.1
+0.1
phage
K25
-0.8
+0.2
+0.0
+0.2
-0.4
phage
JK38
-0.6
-0.6
-0.3
+0.0
+0.7
phage
TP7
-0.2
-1.0
-0.4
+0.0
+0.8
phage
Phi92
-0.9
-0.3
-0.1
+0.0
+0.5
phage
Bas37
+0.0
-0.8
-0.3
+0.0
+0.3
phage
RB51
+0.1
+0.2
-0.0
+0.1
-0.9
phage
Bas52
+0.4
-0.2
+0.0
+0.0
-0.7
phage
Bas27
-0.5
-0.3
-0.1
+0.0
+0.3
phage
Bas37
-0.2
-0.7
-0.2
+0.0
+0.8
phage
Bas27
-0.6
-0.1
-0.1
-0.1
+0.8
phage
K25
+0.3
+0.2
+0.1
+0.0
-0.7
phage
Bas10
-0.3
-0.2
-0.1
-0.1
+0.6
phage
JK16
-0.7
-0.1
-0.1
-0.1
+0.9
phage
CEV1
-0.0
-0.2
-0.4
+0.3
+0.3
phage
JK38
+0.0
-0.4
-0.3
-0.0
+0.7
phage
Bas38
-0.0
-0.1
-0.3
-0.1
+0.7
phage
EV219
-0.1
-0.6
-0.2
-0.1
+1.1
phage
EV219
-0.1
-0.4
-0.2
-0.0
+0.9
phage
Bas05
-0.1
-0.1
-0.1
-0.0
+0.9
phage
Bas04
+0.4
-0.2
-0.0
-0.1
+0.8
phage
JK16
-0.2
+0.2
-0.1
+0.0
+1.1
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ECOLIN_RS19265
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