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Protein
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Fitness for 5 genes in
Escherichia coli Nissle 1917
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500 nt
ECOLIN_RS19120 and ECOLIN_RS19125 are separated by 168 nucleotides
ECOLIN_RS19125 and ECOLIN_RS19130 are separated by 291 nucleotides
ECOLIN_RS19130 and ECOLIN_RS19135 are separated by 70 nucleotides
ECOLIN_RS19135 and ECOLIN_RS19140 are separated by 96 nucleotides
ECOLIN_RS19120: ECOLIN_RS19120 - bacterioferritin-associated ferredoxin, at 3,827,562 to 3,827,756
_RS19120
ECOLIN_RS19125: ECOLIN_RS19125 - bifunctional chitinase/lysozyme, at 3,827,925 to 3,830,627
_RS19125
ECOLIN_RS19130: ECOLIN_RS19130 - elongation factor Tu, at 3,830,919 to 3,832,103
_RS19130
ECOLIN_RS19135: ECOLIN_RS19135 - elongation factor G, at 3,832,174 to 3,834,288
_RS19135
ECOLIN_RS19140: ECOLIN_RS19140 - 30S ribosomal protein S7, at 3,834,385 to 3,834,855
_RS19140
Group
Condition
ECOLIN
_RS19120
ECOLIN
_RS19125
ECOLIN
_RS19130
ECOLIN
_RS19135
ECOLIN
_RS19140
phage
K20
N.D.
-0.1
N.D.
N.D.
N.D.
phage
Bas21
N.D.
-0.1
N.D.
N.D.
N.D.
carbon source
L-Rhamnose
N.D.
-0.1
N.D.
N.D.
N.D.
phage
Bas37
N.D.
+0.1
N.D.
N.D.
N.D.
phage
JK16
N.D.
+0.1
N.D.
N.D.
N.D.
carbon source
Casamino-acids
N.D.
+0.1
N.D.
N.D.
N.D.
phage
Bas27
N.D.
+0.1
N.D.
N.D.
N.D.
phage
TP7
N.D.
+0.1
N.D.
N.D.
N.D.
phage
Bas10
N.D.
+0.1
N.D.
N.D.
N.D.
phage
K20
N.D.
+0.1
N.D.
N.D.
N.D.
phage
Bas48
N.D.
+0.1
N.D.
N.D.
N.D.
no phage control
Control_Nissle
N.D.
+0.1
N.D.
N.D.
N.D.
phage
Bas05
N.D.
+0.1
N.D.
N.D.
N.D.
phage
Bas68
N.D.
+0.1
N.D.
N.D.
N.D.
phage
EV219
N.D.
+0.1
N.D.
N.D.
N.D.
phage
RB51
N.D.
+0.1
N.D.
N.D.
N.D.
carbon source
Casamino-acids
N.D.
+0.1
N.D.
N.D.
N.D.
phage
Bas44
N.D.
+0.1
N.D.
N.D.
N.D.
phage
Bas45
N.D.
+0.2
N.D.
N.D.
N.D.
carbon source
L-Arabinose
N.D.
+0.2
N.D.
N.D.
N.D.
phage
Bas68
N.D.
+0.2
N.D.
N.D.
N.D.
phage
Bas44
N.D.
+0.2
N.D.
N.D.
N.D.
phage
Bas52
N.D.
+0.2
N.D.
N.D.
N.D.
carbon source
D-Glucose
N.D.
+0.2
N.D.
N.D.
N.D.
phage
Bas22
N.D.
+0.2
N.D.
N.D.
N.D.
phage
JK38
N.D.
+0.2
N.D.
N.D.
N.D.
phage
Bas63
N.D.
+0.2
N.D.
N.D.
N.D.
phage
RB51
N.D.
+0.2
N.D.
N.D.
N.D.
phage
K25
N.D.
+0.2
N.D.
N.D.
N.D.
phage
Bas51
N.D.
+0.2
N.D.
N.D.
N.D.
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