Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS18865 and ECOLIN_RS18870 are separated by 14 nucleotidesECOLIN_RS18870 and ECOLIN_RS18875 are separated by 51 nucleotidesECOLIN_RS18875 and ECOLIN_RS18880 are separated by 21 nucleotidesECOLIN_RS18880 and ECOLIN_RS18885 are separated by 129 nucleotides ECOLIN_RS18865: ECOLIN_RS18865 - peptide deformylase, at 3,794,443 to 3,794,952 _RS18865 ECOLIN_RS18870: ECOLIN_RS18870 - methionyl-tRNA formyltransferase, at 3,794,967 to 3,795,914 _RS18870 ECOLIN_RS18875: ECOLIN_RS18875 - 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB, at 3,795,966 to 3,797,255 _RS18875 ECOLIN_RS18880: ECOLIN_RS18880 - Trk system potassium transporter TrkA, at 3,797,277 to 3,798,653 _RS18880 ECOLIN_RS18885: ECOLIN_RS18885 - large-conductance mechanosensitive channel protein MscL, at 3,798,783 to 3,799,196 _RS18885
Group Condition ECOLIN_RS18865 ECOLIN_RS18870 ECOLIN_RS18875 ECOLIN_RS18880 ECOLIN_RS18885
phage TP7 N.D. N.D. -0.4 N.D. -0.4
phage RB51 N.D. N.D. -0.3 N.D. -0.5
carbon source Sodium-DL-Lactate N.D. N.D. -0.6 N.D. -0.2
phage Bas04 N.D. N.D. -0.3 N.D. -0.5
phage Bas05 N.D. N.D. -0.4 N.D. -0.4
carbon source L-Arabinose N.D. N.D. -0.1 N.D. -0.6
carbon source D-Glucose N.D. N.D. -0.4 N.D. -0.2
carbon source D-Glucose N.D. N.D. -0.3 N.D. -0.3
phage Bas52 N.D. N.D. -0.6 N.D. +0.2
carbon source L-Arabinose N.D. N.D. -0.6 N.D. +0.2
phage Bas48 N.D. N.D. -0.2 N.D. -0.2
phage Bas68 N.D. N.D. -0.4 N.D. -0.0
phage Bas37 N.D. N.D. -0.1 N.D. -0.3
phage Bas51 N.D. N.D. -0.5 N.D. +0.1
no phage control Control_Nissle N.D. N.D. -0.4 N.D. +0.0
phage P1vir N.D. N.D. +0.2 N.D. -0.4
phage RB51 N.D. N.D. -0.3 N.D. +0.2
phage JK16 N.D. N.D. -0.3 N.D. +0.2
carbon source L-Rhamnose N.D. N.D. +0.2 N.D. -0.2
phage Bas63 N.D. N.D. -0.3 N.D. +0.3
phage Bas21 N.D. N.D. +0.4 N.D. -0.2
phage Phi92 N.D. N.D. +0.5 N.D. -0.2
phage JK38 N.D. N.D. -0.2 N.D. +0.5
phage Bas45 N.D. N.D. +0.4 N.D. -0.1
no phage control Control_Nissle N.D. N.D. -0.0 N.D. +0.4
phage Bas21 N.D. N.D. +0.4 N.D. +0.1
phage Bas63 N.D. N.D. +0.2 N.D. +0.3
carbon source L-Rhamnose N.D. N.D. -0.1 N.D. +0.7
phage CEV1 N.D. N.D. +0.5 N.D. +0.1
phage EV219 N.D. N.D. +0.1 N.D. +0.6
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