Fitness for 5 genes in Escherichia coli Nissle 1917

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 62 experiments or choose conditions or try the comparative fitness browser

500 ntECOLIN_RS18620 and ECOLIN_RS18625 are separated by 65 nucleotidesECOLIN_RS18625 and ECOLIN_RS18635 are separated by 304 nucleotidesECOLIN_RS18635 and ECOLIN_RS18640 are separated by 151 nucleotidesECOLIN_RS18640 and ECOLIN_RS33035 are separated by 185 nucleotides ECOLIN_RS18620: ECOLIN_RS18620 - rod shape-determining protein MreC, at 3,752,419 to 3,753,522 _RS18620 ECOLIN_RS18625: ECOLIN_RS18625 - rod shape-determining protein MreB, at 3,753,588 to 3,754,631 _RS18625 ECOLIN_RS18635: ECOLIN_RS18635 - RNase E specificity factor CsrD, at 3,754,936 to 3,756,876 _RS18635 ECOLIN_RS18640: ECOLIN_RS18640 - MDR family oxidoreductase, at 3,757,028 to 3,758,002 _RS18640 ECOLIN_RS33035: ECOLIN_RS33035 - sulfoxide reductase heme-binding subunit YedZ, at 3,758,188 to 3,758,575 _RS33035
Group Condition ECOLIN_RS18620 ECOLIN_RS18625 ECOLIN_RS18635 ECOLIN_RS18640 ECOLIN_RS33035
carbon source L-Arabinose N.D. N.D. -0.2 +0.1 -0.4
phage RB51 N.D. N.D. +0.1 -0.2 -0.3
phage P1vir N.D. N.D. +0.1 -0.4 -0.1
phage Bas52 N.D. N.D. +0.2 -0.1 -0.3
phage Bas22 N.D. N.D. +0.1 +0.2 -0.5
phage Bas63 N.D. N.D. +0.2 +0.0 -0.3
phage Bas27 N.D. N.D. +0.0 +0.4 -0.5
no phage control Control_Nissle N.D. N.D. +0.2 +0.0 -0.3
phage Bas10 N.D. N.D. -0.0 +0.3 -0.4
carbon source Casamino-acids N.D. N.D. -0.1 +0.3 -0.2
phage EV219 N.D. N.D. -0.1 +0.4 -0.2
phage K20 N.D. N.D. +0.2 -0.3 +0.3
carbon source D-Glucose N.D. N.D. -0.1 +0.4 -0.0
phage Bas04 N.D. N.D. +0.1 +0.3 -0.1
phage Bas44 N.D. N.D. -0.1 +0.3 +0.1
phage Bas05 N.D. N.D. -0.1 +0.4 +0.0
phage JK38 N.D. N.D. -0.2 +0.5 +0.1
carbon source Sodium-DL-Lactate N.D. N.D. -0.1 +0.3 +0.2
no phage control Control_Nissle N.D. N.D. +0.3 +0.3 +0.0
phage Phi92 N.D. N.D. +0.2 -0.0 +0.4
phage K25 N.D. N.D. +0.2 +0.4 +0.1
phage Bas63 N.D. N.D. +0.3 +0.2 +0.1
phage Bas04 N.D. N.D. +0.1 +0.3 +0.2
phage Bas68 N.D. N.D. +0.1 +0.4 +0.3
carbon source Sodium-DL-Lactate N.D. N.D. +0.0 +0.6 +0.2
phage Bas37 N.D. N.D. +0.0 +0.6 +0.2
phage Bas51 N.D. N.D. +0.2 +0.4 +0.2
carbon source L-Rhamnose N.D. N.D. -0.1 +0.3 +0.7
phage RB51 N.D. N.D. +0.2 +0.7 +0.0
carbon source L-Rhamnose N.D. N.D. -0.2 +1.4 +0.0
remove
ECOLIN_RS18620
plot		 remove
ECOLIN_RS18625
plot		 remove
ECOLIN_RS18635		 remove
ECOLIN_RS18640
plot		 remove
ECOLIN_RS33035
plot