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Protein
Homologs
Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS18070 and ECOLIN_RS18075 overlap by 11 nucleotides
ECOLIN_RS18075 and ECOLIN_RS18080 are separated by 0 nucleotides
ECOLIN_RS18080 and ECOLIN_RS18085 are separated by 49 nucleotides
ECOLIN_RS18085 and ECOLIN_RS18090 are separated by 65 nucleotides
ECOLIN_RS18070: ECOLIN_RS18070 - PTS galactosamine transporter subunit IIC, at 3,643,347 to 3,644,150
_RS18070
ECOLIN_RS18075: ECOLIN_RS18075 - PTS galactosamine transporter subunit IID, at 3,644,140 to 3,644,931
_RS18075
ECOLIN_RS18080: ECOLIN_RS18080 - galactosamine-6-phosphate isomerase, at 3,644,932 to 3,645,699
_RS18080
ECOLIN_RS18085: ECOLIN_RS18085 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase, at 3,645,749 to 3,646,612
_RS18085
ECOLIN_RS18090: ECOLIN_RS18090 - penicillin-binding protein activator LpoA, at 3,646,678 to 3,648,714
_RS18090
Group
Condition
ECOLIN
_RS18070
ECOLIN
_RS18075
ECOLIN
_RS18080
ECOLIN
_RS18085
ECOLIN
_RS18090
phage
Bas22
+0.2
-0.1
-0.2
-3.7
+1.4
phage
Bas44
-0.0
-0.2
-0.5
-0.7
-0.9
phage
Bas44
-0.1
-0.1
-0.2
-1.4
-0.4
phage
K25
-0.0
-0.2
+0.0
-2.0
+0.1
carbon source
L-Rhamnose
+0.4
+0.2
+0.6
-2.9
-0.0
phage
Bas68
-0.2
-0.0
-0.0
-1.3
-0.3
phage
RB51
-0.1
-0.2
+0.0
-0.8
-0.6
phage
Phi92
+0.3
+0.0
-0.1
-1.7
-0.2
phage
Bas22
-0.2
+0.1
-0.0
-2.0
+0.5
phage
Bas48
-0.1
-0.1
-0.1
-1.6
+0.2
phage
K20
+0.0
-0.1
+0.1
-1.3
-0.3
phage
Bas48
+0.1
+0.0
+0.2
-2.1
+0.7
phage
Bas27
+0.2
-0.1
-0.2
-1.4
+0.4
phage
Bas05
-0.1
+0.3
+0.1
-1.4
+0.1
phage
JK38
+0.0
+0.2
-0.1
-1.5
+1.0
phage
P1vir
-0.2
+0.1
-0.3
-1.0
+1.2
phage
JK38
+0.1
+0.1
-0.1
-1.3
+1.6
phage
TP7
+0.1
+0.1
-0.2
-1.4
+2.3
phage
TP7
+0.2
+0.1
-0.1
-1.5
+2.4
phage
Bas45
-0.2
+0.0
-0.0
-0.4
+1.7
phage
Bas31
+0.1
+0.1
-0.3
+0.2
+1.1
phage
EV219
-0.1
+0.2
-0.3
-1.0
+2.5
phage
Bas37
+0.0
+0.3
-0.4
-0.5
+1.8
phage
EV219
+0.2
+0.2
+0.0
-0.6
+1.6
phage
Bas38
+0.2
+0.1
-0.2
-0.6
+2.4
carbon source
L-Arabinose
+0.2
+0.0
+0.1
+1.6
+0.0
phage
Bas37
+0.3
+0.3
-0.2
+0.1
+1.6
phage
Bas21
+0.1
+0.0
-0.1
-1.0
+3.1
phage
Bas38
+0.1
+0.1
-0.3
-0.3
+2.7
phage
Bas21
+0.1
+0.2
-0.1
-0.2
+3.1
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