Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS18055 and ECOLIN_RS18060 are separated by 12 nucleotidesECOLIN_RS18060 and ECOLIN_RS18065 are separated by 166 nucleotidesECOLIN_RS18065 and ECOLIN_RS18070 are separated by 38 nucleotidesECOLIN_RS18070 and ECOLIN_RS18075 overlap by 11 nucleotides ECOLIN_RS18055: ECOLIN_RS18055 - AgaS family sugar isomerase, at 3,640,638 to 3,641,792 _RS18055 ECOLIN_RS18060: ECOLIN_RS18060 - tagatose-bisphosphate aldolase subunit KbaY, at 3,641,805 to 3,642,665 _RS18060 ECOLIN_RS18065: ECOLIN_RS18065 - PTS galactosamine transporter subunit IIB, at 3,642,832 to 3,643,308 _RS18065 ECOLIN_RS18070: ECOLIN_RS18070 - PTS galactosamine transporter subunit IIC, at 3,643,347 to 3,644,150 _RS18070 ECOLIN_RS18075: ECOLIN_RS18075 - PTS galactosamine transporter subunit IID, at 3,644,140 to 3,644,931 _RS18075
Group Condition ECOLIN_RS18055 ECOLIN_RS18060 ECOLIN_RS18065 ECOLIN_RS18070 ECOLIN_RS18075
no phage control Control_Nissle -0.2 -0.1 N.D. -0.2 -0.1
carbon source D-Glucose -0.4 -0.2 N.D. +0.1 -0.1
phage Bas68 -0.1 -0.4 N.D. -0.1 -0.1
phage RB51 -0.1 -0.1 N.D. -0.1 -0.2
phage Bas52 -0.1 -0.0 N.D. -0.4 -0.1
phage K25 +0.1 -0.4 N.D. -0.0 -0.2
phage Bas21 -0.2 -0.4 N.D. +0.1 +0.0
phage RB51 -0.3 +0.1 N.D. -0.1 -0.1
phage Bas45 -0.3 +0.1 N.D. -0.2 +0.0
phage Bas44 -0.2 +0.2 N.D. -0.0 -0.2
phage RB68 +0.2 -0.3 N.D. -0.1 -0.1
phage EV219 -0.1 -0.3 N.D. -0.1 +0.2
phage JK38 -0.2 -0.2 N.D. +0.0 +0.2
phage Bas22 -0.2 +0.2 N.D. -0.2 +0.1
phage Bas31 -0.1 -0.3 N.D. +0.1 +0.1
phage K20 -0.3 +0.2 N.D. +0.0 -0.1
phage P1vir -0.2 +0.1 N.D. -0.2 +0.1
phage EV219 -0.1 -0.4 N.D. +0.2 +0.2
phage CEV1 -0.1 -0.2 N.D. +0.2 +0.0
carbon source Casamino-acids +0.1 -0.2 N.D. +0.2 -0.1
phage Bas52 -0.3 +0.3 N.D. -0.0 +0.1
phage Bas21 +0.1 -0.4 N.D. +0.1 +0.2
phage Bas38 -0.3 +0.2 N.D. +0.2 +0.1
carbon source Sodium-DL-Lactate +0.1 -0.1 N.D. +0.2 -0.1
phage Bas37 -0.0 -0.3 N.D. +0.3 +0.3
carbon source Casamino-acids +0.0 +0.2 N.D. +0.3 -0.1
carbon source L-Arabinose -0.2 +0.3 N.D. +0.2 +0.0
phage Bas22 -0.0 +0.5 N.D. +0.2 -0.1
carbon source L-Rhamnose +0.2 +0.6 N.D. -0.1 -0.0
carbon source L-Rhamnose -0.3 +0.8 N.D. +0.4 +0.2
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