Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS17815 and ECOLIN_RS17820 are separated by 3 nucleotidesECOLIN_RS17820 and ECOLIN_RS17825 are separated by 82 nucleotidesECOLIN_RS17825 and ECOLIN_RS17830 are separated by 14 nucleotidesECOLIN_RS17830 and ECOLIN_RS17835 are separated by 482 nucleotides ECOLIN_RS17815: ECOLIN_RS17815 - serine/threonine transporter SstT, at 3,593,708 to 3,594,952 _RS17815 ECOLIN_RS17820: ECOLIN_RS17820 - YgjV family protein, at 3,594,956 to 3,595,507 _RS17820 ECOLIN_RS17825: ECOLIN_RS17825 - altronate dehydratase, at 3,595,590 to 3,597,077 _RS17825 ECOLIN_RS17830: ECOLIN_RS17830 - glucuronate isomerase, at 3,597,092 to 3,598,504 _RS17830 ECOLIN_RS17835: ECOLIN_RS17835 - hexuronate transporter ExuT, at 3,598,987 to 3,600,285 _RS17835
Group Condition ECOLIN_RS17815 ECOLIN_RS17820 ECOLIN_RS17825 ECOLIN_RS17830 ECOLIN_RS17835
carbon source D-Glucose -0.1 -0.1 -0.1 -0.2 +0.1
phage K25 +0.1 +0.0 -0.2 -0.2 +0.1
phage RB68 +0.1 -0.1 -0.2 +0.1 -0.1
phage JK16 +0.2 -0.3 -0.2 -0.1 +0.2
no phage control Control_Nissle +0.3 -0.1 -0.0 -0.2 -0.1
phage Bas04 +0.1 -0.1 +0.3 -0.1 -0.2
phage Bas05 +0.3 -0.1 +0.2 -0.2 -0.2
phage Bas52 +0.1 +0.2 -0.2 -0.2 -0.0
carbon source L-Rhamnose -0.1 +0.0 -0.2 +0.2 +0.1
phage Bas45 +0.2 -0.3 -0.1 +0.0 +0.2
phage JK38 +0.1 +0.1 +0.1 -0.2 -0.2
phage Bas21 +0.3 +0.1 +0.1 -0.2 -0.1
phage Phi92 +0.3 +0.0 +0.1 -0.2 -0.1
phage Bas21 +0.3 -0.1 +0.3 -0.2 -0.2
phage Bas22 +0.3 -0.0 -0.0 -0.3 +0.1
phage Phi92 -0.1 +0.1 +0.3 -0.2 +0.0
phage Bas27 +0.2 +0.2 +0.2 -0.3 -0.1
phage K20 +0.3 +0.1 -0.2 +0.0 +0.0
phage Bas31 +0.3 -0.0 +0.1 -0.0 -0.2
phage Bas37 +0.4 +0.1 +0.0 -0.2 -0.1
phage Bas51 +0.1 -0.1 -0.1 +0.2 +0.2
no phage control Control_Nissle +0.4 -0.1 +0.0 -0.1 +0.1
phage EV219 +0.1 +0.1 +0.2 -0.1 +0.1
phage CEV1 +0.4 -0.1 +0.3 -0.1 -0.1
carbon source Casamino-acids +0.2 -0.0 +0.2 -0.0 +0.2
phage Bas37 +0.5 -0.0 +0.2 +0.0 -0.0
phage Bas38 +0.3 +0.1 +0.2 +0.1 +0.1
phage TP7 +0.2 +0.2 +0.1 +0.1 +0.1
phage Bas05 +0.4 +0.0 +0.0 +0.4 +0.0
phage Bas38 +0.3 +0.3 +0.3 +0.2 +0.1
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