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Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS17715 and ECOLIN_RS17720 are separated by 53 nucleotides
ECOLIN_RS17720 and ECOLIN_RS17725 are separated by 287 nucleotides
ECOLIN_RS17725 and ECOLIN_RS17730 are separated by 153 nucleotides
ECOLIN_RS17730 and ECOLIN_RS17735 are separated by 417 nucleotides
ECOLIN_RS17715: ECOLIN_RS17715 - tRNA-Ile, at 3,569,939 to 3,570,014
_RS17715
ECOLIN_RS17720: ECOLIN_RS17720 - NADPH-dependent ferric chelate reductase NfeF, at 3,570,068 to 3,570,832
_RS17720
ECOLIN_RS17725: ECOLIN_RS17725 - DNA-binding transcriptional regulator NfeR, at 3,571,120 to 3,571,764
_RS17725
ECOLIN_RS17730: ECOLIN_RS17730 - aerotaxis sensor receptor Aer, at 3,571,918 to 3,573,438
_RS17730
ECOLIN_RS17735: ECOLIN_RS17735 - putrescine aminotransferase, at 3,573,856 to 3,575,235
_RS17735
Group
Condition
ECOLIN
_RS17715
ECOLIN
_RS17720
ECOLIN
_RS17725
ECOLIN
_RS17730
ECOLIN
_RS17735
phage
P1vir
N.D.
-0.4
N.D.
-0.0
-0.3
phage
RB68
N.D.
+0.0
N.D.
-0.0
-0.3
phage
Bas45
N.D.
-0.1
N.D.
-0.1
-0.2
phage
RB51
N.D.
-0.1
N.D.
-0.1
-0.0
phage
Bas48
N.D.
-0.0
N.D.
+0.1
-0.2
phage
Bas68
N.D.
+0.1
N.D.
+0.1
-0.2
phage
Bas63
N.D.
+0.1
N.D.
-0.1
-0.1
phage
RB68
N.D.
-0.1
N.D.
+0.3
-0.1
phage
Bas52
N.D.
+0.0
N.D.
+0.2
-0.3
no phage control
Control_Nissle
N.D.
-0.1
N.D.
+0.2
-0.1
phage
K25
N.D.
+0.1
N.D.
+0.1
-0.1
phage
P1vir
N.D.
+0.4
N.D.
-0.1
-0.1
phage
Bas44
N.D.
+0.2
N.D.
-0.1
+0.0
phage
K20
N.D.
+0.2
N.D.
+0.0
-0.1
phage
K20
N.D.
-0.2
N.D.
+0.3
+0.1
phage
Bas52
N.D.
+0.1
N.D.
+0.1
-0.0
phage
Bas22
N.D.
-0.1
N.D.
+0.2
+0.2
phage
Bas68
N.D.
+0.1
N.D.
+0.2
-0.0
phage
Bas48
N.D.
+0.4
N.D.
+0.0
-0.1
phage
Bas51
N.D.
+0.2
N.D.
+0.2
-0.1
phage
Bas22
N.D.
+0.2
N.D.
+0.2
-0.1
no phage control
Control_Nissle
N.D.
+0.2
N.D.
+0.3
-0.0
phage
K25
N.D.
+0.1
N.D.
+0.2
+0.1
phage
RB51
N.D.
+0.2
N.D.
+0.0
+0.2
phage
Bas63
N.D.
+0.3
N.D.
+0.1
+0.1
phage
Bas44
N.D.
+0.7
N.D.
+0.0
-0.2
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ECOLIN_RS17725
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