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Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS17650 and ECOLIN_RS17655 are separated by 79 nucleotides
ECOLIN_RS17655 and ECOLIN_RS17660 are separated by 90 nucleotides
ECOLIN_RS17660 and ECOLIN_RS17665 are separated by 104 nucleotides
ECOLIN_RS17665 and ECOLIN_RS17670 are separated by 12 nucleotides
ECOLIN_RS17650: ECOLIN_RS17650 - fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca, at 3,556,331 to 3,557,569
_RS17650
ECOLIN_RS17655: ECOLIN_RS17655 - undecaprenyl-diphosphate phosphatase, at 3,557,649 to 3,558,470
_RS17655
ECOLIN_RS17660: ECOLIN_RS17660 - bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase, at 3,558,561 to 3,558,929
_RS17660
ECOLIN_RS17665: ECOLIN_RS17665 - glycerol-3-phosphate 1-O-acyltransferase PlsY, at 3,559,034 to 3,559,651
_RS17665
ECOLIN_RS17670: ECOLIN_RS17670 - L-tartrate utilization transcriptional activator TtdR, at 3,559,664 to 3,560,596
_RS17670
Group
Condition
ECOLIN
_RS17650
ECOLIN
_RS17655
ECOLIN
_RS17660
ECOLIN
_RS17665
ECOLIN
_RS17670
carbon source
L-Rhamnose
N.D.
-0.2
N.D.
+0.3
-0.8
phage
Bas37
N.D.
-0.3
N.D.
+0.3
-0.6
phage
JK38
N.D.
-0.4
N.D.
+0.2
-0.4
carbon source
D-Glucose
N.D.
-0.2
N.D.
+0.2
-0.5
phage
JK38
N.D.
-0.2
N.D.
+0.3
-0.3
phage
Bas45
N.D.
-0.4
N.D.
-0.2
+0.5
phage
Bas31
N.D.
+0.3
N.D.
+0.3
-0.6
phage
TP7
N.D.
-0.5
N.D.
+0.5
+0.1
carbon source
L-Arabinose
N.D.
-0.0
N.D.
+0.5
-0.3
phage
TP7
N.D.
-0.3
N.D.
+0.5
+0.1
phage
Bas44
N.D.
-0.1
N.D.
-0.2
+0.6
phage
Bas21
N.D.
+0.2
N.D.
+0.3
-0.2
phage
Bas37
N.D.
-0.3
N.D.
+0.4
+0.5
phage
RB51
N.D.
+0.1
N.D.
-0.1
+0.6
phage
Bas68
N.D.
+0.0
N.D.
-0.1
+0.8
phage
Bas51
N.D.
+0.1
N.D.
-0.0
+0.7
phage
EV219
N.D.
+0.1
N.D.
+0.3
+0.4
phage
Bas52
N.D.
+0.1
N.D.
-0.1
+0.7
phage
Bas22
N.D.
-0.1
N.D.
+0.3
+0.6
phage
Bas38
N.D.
+0.1
N.D.
+0.6
+0.2
phage
Bas38
N.D.
+0.0
N.D.
+0.6
+0.2
carbon source
L-Rhamnose
N.D.
+0.1
N.D.
+0.7
+0.1
phage
Bas22
N.D.
+0.3
N.D.
+0.3
+0.3
carbon source
L-Arabinose
N.D.
+0.1
N.D.
+0.4
+0.4
phage
Bas10
N.D.
+0.2
N.D.
+0.5
+0.4
phage
K25
N.D.
+0.0
N.D.
+0.5
+0.7
phage
Bas04
N.D.
+0.1
N.D.
+0.4
+0.6
phage
Bas48
N.D.
+0.2
N.D.
+0.3
+0.7
phage
Bas48
N.D.
+0.2
N.D.
+0.3
+0.9
phage
Bas21
N.D.
+0.6
N.D.
+0.4
+0.5
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