Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS17630 and ECOLIN_RS17635 are separated by 12 nucleotidesECOLIN_RS17635 and ECOLIN_RS17645 are separated by 342 nucleotidesECOLIN_RS17645 and ECOLIN_RS17650 are separated by 63 nucleotidesECOLIN_RS17650 and ECOLIN_RS17655 are separated by 79 nucleotides ECOLIN_RS17630: ECOLIN_RS17630 - IS200/IS605-like element ISEc41 family transposase, at 3,553,634 to 3,554,086 _RS17630 ECOLIN_RS17635: ECOLIN_RS17635 - RNA-guided endonuclease TnpB family protein, at 3,554,099 to 3,555,304 _RS17635 ECOLIN_RS17645: ECOLIN_RS17645 - TIGR04211 family SH3 domain-containing protein, at 3,555,647 to 3,556,267 _RS17645 ECOLIN_RS17650: ECOLIN_RS17650 - fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca, at 3,556,331 to 3,557,569 _RS17650 ECOLIN_RS17655: ECOLIN_RS17655 - undecaprenyl-diphosphate phosphatase, at 3,557,649 to 3,558,470 _RS17655
Group Condition ECOLIN_RS17630 ECOLIN_RS17635 ECOLIN_RS17645 ECOLIN_RS17650 ECOLIN_RS17655
phage Bas45 +0.1 -0.0 -1.1 N.D. -0.4
phage TP7 +0.3 +0.1 -1.2 N.D. -0.5
phage EV219 +0.1 -0.1 -1.2 N.D. -0.0
phage Bas37 +0.2 -0.1 -1.2 N.D. -0.3
phage JK38 +0.3 +0.0 -1.1 N.D. -0.4
phage TP7 +0.4 +0.1 -1.2 N.D. -0.3
phage JK38 +0.4 +0.0 -1.2 N.D. -0.2
phage Bas31 +0.3 -0.0 -1.1 N.D. +0.0
phage EV219 +0.4 -0.1 -1.2 N.D. +0.1
no phage control Control_Nissle -0.2 -0.1 -0.4 N.D. -0.0
phage Bas37 +0.3 -0.1 -0.6 N.D. -0.3
phage Bas27 +0.2 -0.1 -0.7 N.D. -0.1
phage Bas44 -0.2 -0.1 -0.4 N.D. +0.1
phage Bas21 +0.6 -0.1 -1.3 N.D. +0.2
phage Bas48 -0.2 -0.1 -0.3 N.D. +0.2
phage Bas31 +0.2 -0.0 -0.8 N.D. +0.3
phage Bas27 +0.2 +0.1 -0.4 N.D. -0.1
phage Bas51 +0.2 -0.1 -0.4 N.D. +0.1
phage JK16 -0.0 +0.0 -0.4 N.D. +0.2
phage Bas48 +0.1 -0.2 -0.3 N.D. +0.2
phage Bas44 -0.2 -0.1 +0.3 N.D. -0.1
phage Bas04 +0.3 -0.1 -0.5 N.D. +0.1
phage Bas22 -0.1 -0.2 -0.2 N.D. +0.3
phage Bas38 +0.2 -0.0 -0.4 N.D. +0.1
phage Bas10 +0.2 +0.0 -0.4 N.D. +0.1
phage Bas21 +0.2 -0.0 -0.7 N.D. +0.6
carbon source Casamino-acids +0.2 -0.0 +0.5 N.D. -0.2
phage RB51 +0.3 -0.1 +0.2 N.D. +0.1
carbon source L-Rhamnose +0.4 -0.0 +0.5 N.D. -0.2
carbon source L-Rhamnose -0.1 +0.6 +0.3 N.D. +0.1
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