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Protein
Homologs
Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS17555 and ECOLIN_RS32105 are separated by 61 nucleotides
ECOLIN_RS32105 and ECOLIN_RS17565 are separated by 570 nucleotides
ECOLIN_RS17565 and ECOLIN_RS17570 are separated by 86 nucleotides
ECOLIN_RS17570 and ECOLIN_RS17575 are separated by 15 nucleotides
ECOLIN_RS17555: ECOLIN_RS17555 - zinc transporter ZupT, at 3,536,748 to 3,537,521
_RS17555
ECOLIN_RS32105: ECOLIN_RS32105 - hypothetical protein, at 3,537,583 to 3,537,753
_RS32105
ECOLIN_RS17565: ECOLIN_RS17565 - fimbrial-like protein, at 3,538,324 to 3,538,887
_RS17565
ECOLIN_RS17570: ECOLIN_RS17570 - fimbria/pilus outer membrane usher protein, at 3,538,974 to 3,541,496
_RS17570
ECOLIN_RS17575: ECOLIN_RS17575 - fimbria/pilus periplasmic chaperone, at 3,541,512 to 3,542,252
_RS17575
Group
Condition
ECOLIN
_RS17555
ECOLIN
_RS32105
ECOLIN
_RS17565
ECOLIN
_RS17570
ECOLIN
_RS17575
phage
EV219
-0.4
N.D.
-1.3
+0.1
-0.4
phage
Bas22
-0.7
N.D.
-0.8
-0.0
-0.1
phage
P1vir
-0.5
N.D.
-0.6
-0.2
-0.3
phage
Bas63
-0.1
N.D.
-0.9
+0.1
-0.6
phage
Bas10
-0.9
N.D.
-0.8
+0.1
+0.1
phage
TP7
-0.5
N.D.
-0.5
+0.1
-0.6
phage
Bas31
-0.9
N.D.
-0.5
+0.1
-0.1
phage
RB51
-0.1
N.D.
-0.7
-0.1
-0.5
phage
Bas38
-0.6
N.D.
-1.1
+0.2
+0.1
phage
Bas48
-0.1
N.D.
-1.2
-0.0
-0.1
phage
Bas38
-0.9
N.D.
-0.6
-0.0
+0.2
phage
Bas04
-0.7
N.D.
-0.7
+0.3
+0.0
phage
Bas05
-1.0
N.D.
-0.3
+0.3
-0.0
carbon source
L-Rhamnose
-0.6
N.D.
-0.1
+0.3
-0.4
phage
JK38
-0.7
N.D.
-0.7
+0.2
+0.3
phage
Bas21
-0.9
N.D.
-0.6
+0.3
+0.4
phage
CEV1
-0.5
N.D.
-1.1
+0.4
+0.4
phage
Bas52
-0.6
N.D.
-0.6
+0.1
+0.3
phage
Bas45
+0.0
N.D.
-1.0
+0.3
+0.1
phage
K25
+0.3
N.D.
-0.4
-0.0
-0.6
phage
Bas22
-0.4
N.D.
-0.8
+0.2
+0.4
phage
EV219
-0.3
N.D.
-0.7
+0.1
+0.3
phage
Bas27
-1.0
N.D.
-0.0
+0.2
+0.4
phage
JK16
-0.7
N.D.
-0.5
+0.2
+0.8
phage
Bas27
-0.7
N.D.
+0.1
+0.1
+0.5
phage
Phi92
+0.0
N.D.
-0.8
+0.4
+0.6
phage
Bas21
-0.4
N.D.
-0.2
+0.3
+0.4
phage
CEV1
-0.7
N.D.
+0.4
+0.1
+0.4
phage
K20
+0.4
N.D.
+0.6
+0.1
+0.4
carbon source
L-Arabinose
+0.6
N.D.
+0.9
+0.1
+0.1
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