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Protein
Homologs
Fitness for 5 genes in
Escherichia coli Nissle 1917
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500 nt
ECOLIN_RS17400 and ECOLIN_RS17405 are separated by 234 nucleotides
ECOLIN_RS17405 and ECOLIN_RS17410 are separated by 137 nucleotides
ECOLIN_RS17410 and ECOLIN_RS17415 are separated by 108 nucleotides
ECOLIN_RS17415 and ECOLIN_RS17420 are separated by 52 nucleotides
ECOLIN_RS17400: ECOLIN_RS17400 - 1-acylglycerol-3-phosphate O-acyltransferase, at 3,505,819 to 3,506,556
_RS17400
ECOLIN_RS17405: ECOLIN_RS17405 - DNA topoisomerase IV subunit A, at 3,506,791 to 3,509,049
_RS17405
ECOLIN_RS17410: ECOLIN_RS17410 - ABC transporter substrate-binding protein, at 3,509,187 to 3,510,794
_RS17410
ECOLIN_RS17415: ECOLIN_RS17415 - GyrI-like domain-containing protein, at 3,510,903 to 3,511,385
_RS17415
ECOLIN_RS17420: ECOLIN_RS17420 - OB fold stress tolerance protein YgiW, at 3,511,438 to 3,511,830
_RS17420
Group
Condition
ECOLIN
_RS17400
ECOLIN
_RS17405
ECOLIN
_RS17410
ECOLIN
_RS17415
ECOLIN
_RS17420
phage
EV219
N.D.
N.D.
-0.1
-3.8
+0.1
phage
Bas31
N.D.
N.D.
-0.2
-3.4
+0.1
phage
Bas04
N.D.
N.D.
-0.1
-3.4
+0.2
phage
TP7
N.D.
N.D.
+0.1
-3.0
-0.2
phage
Bas27
N.D.
N.D.
+0.2
-3.3
+0.2
carbon source
Sodium-DL-Lactate
N.D.
N.D.
+0.1
-2.1
-0.1
phage
JK38
N.D.
N.D.
-0.1
-2.1
+0.0
phage
Bas22
N.D.
N.D.
+0.1
-2.3
+0.1
phage
Bas22
N.D.
N.D.
+0.1
-2.4
+0.2
phage
EV219
N.D.
N.D.
-0.1
-1.9
-0.1
phage
Bas04
N.D.
N.D.
-0.0
-1.9
+0.2
phage
Bas48
N.D.
N.D.
-0.2
-1.5
+0.1
phage
Bas10
N.D.
N.D.
-0.1
-1.3
+0.0
phage
P1vir
N.D.
N.D.
-0.1
-1.4
+0.1
phage
Bas31
N.D.
N.D.
+0.0
-1.3
-0.0
phage
JK38
N.D.
N.D.
-0.1
-1.2
+0.1
phage
JK16
N.D.
N.D.
-0.0
-1.0
+0.1
phage
Bas21
N.D.
N.D.
+0.1
-1.1
+0.3
phage
Bas27
N.D.
N.D.
+0.0
-0.8
+0.2
phage
JK16
N.D.
N.D.
-0.1
+1.0
-0.1
phage
Bas63
N.D.
N.D.
-0.0
+0.7
+0.3
carbon source
L-Arabinose
N.D.
N.D.
+0.1
+1.0
-0.1
phage
K20
N.D.
N.D.
+0.1
+1.0
-0.0
phage
RB68
N.D.
N.D.
+0.1
+0.9
+0.2
phage
Bas68
N.D.
N.D.
+0.0
+1.2
+0.1
phage
K20
N.D.
N.D.
+0.3
+0.8
+0.2
carbon source
L-Rhamnose
N.D.
N.D.
-0.3
+1.9
-0.2
carbon source
L-Arabinose
N.D.
N.D.
+0.0
+1.9
+0.0
carbon source
L-Rhamnose
N.D.
N.D.
+0.2
+1.9
+0.0
carbon source
D-Glucose
N.D.
N.D.
-0.1
+2.1
+0.2
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