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Protein
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Fitness for 5 genes in
Escherichia coli Nissle 1917
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500 nt
ECOLIN_RS17395 and ECOLIN_RS17400 are separated by 74 nucleotides
ECOLIN_RS17400 and ECOLIN_RS17405 are separated by 234 nucleotides
ECOLIN_RS17405 and ECOLIN_RS17410 are separated by 137 nucleotides
ECOLIN_RS17410 and ECOLIN_RS17415 are separated by 108 nucleotides
ECOLIN_RS17395: ECOLIN_RS17395 - cell division protein FtsP, at 3,504,332 to 3,505,744
_RS17395
ECOLIN_RS17400: ECOLIN_RS17400 - 1-acylglycerol-3-phosphate O-acyltransferase, at 3,505,819 to 3,506,556
_RS17400
ECOLIN_RS17405: ECOLIN_RS17405 - DNA topoisomerase IV subunit A, at 3,506,791 to 3,509,049
_RS17405
ECOLIN_RS17410: ECOLIN_RS17410 - ABC transporter substrate-binding protein, at 3,509,187 to 3,510,794
_RS17410
ECOLIN_RS17415: ECOLIN_RS17415 - GyrI-like domain-containing protein, at 3,510,903 to 3,511,385
_RS17415
Group
Condition
ECOLIN
_RS17395
ECOLIN
_RS17400
ECOLIN
_RS17405
ECOLIN
_RS17410
ECOLIN
_RS17415
phage
EV219
-1.7
N.D.
N.D.
-0.1
-3.8
phage
TP7
-2.5
N.D.
N.D.
+0.1
-3.0
phage
JK38
-2.3
N.D.
N.D.
-0.1
-2.1
phage
Bas31
-0.8
N.D.
N.D.
-0.2
-3.4
phage
EV219
-2.2
N.D.
N.D.
-0.1
-1.9
phage
Bas04
-0.5
N.D.
N.D.
-0.1
-3.4
phage
Bas27
-0.6
N.D.
N.D.
+0.2
-3.3
phage
Bas21
-2.2
N.D.
N.D.
+0.1
-1.1
phage
TP7
-3.0
N.D.
N.D.
-0.1
-0.0
phage
Bas22
-0.8
N.D.
N.D.
+0.1
-2.4
phage
Bas22
-0.8
N.D.
N.D.
+0.1
-2.3
phage
P1vir
-1.5
N.D.
N.D.
-0.1
-1.4
phage
JK38
-1.4
N.D.
N.D.
-0.1
-1.2
phage
Bas45
-2.3
N.D.
N.D.
-0.1
-0.2
phage
Bas48
-0.9
N.D.
N.D.
-0.2
-1.5
phage
Bas37
-2.1
N.D.
N.D.
-0.1
-0.1
phage
Bas04
-0.2
N.D.
N.D.
-0.0
-1.9
phage
Bas31
-0.8
N.D.
N.D.
+0.0
-1.3
carbon source
Sodium-DL-Lactate
-0.0
N.D.
N.D.
+0.1
-2.1
phage
Bas21
-1.8
N.D.
N.D.
+0.0
-0.0
phage
Bas10
-0.4
N.D.
N.D.
-0.1
-1.3
phage
Bas05
-0.8
N.D.
N.D.
-0.1
-0.8
phage
Bas38
-1.2
N.D.
N.D.
-0.1
-0.3
phage
Bas37
-1.3
N.D.
N.D.
-0.1
+0.5
phage
JK16
-0.7
N.D.
N.D.
-0.1
+1.0
phage
Bas68
-0.7
N.D.
N.D.
+0.0
+1.2
carbon source
L-Rhamnose
-0.9
N.D.
N.D.
-0.3
+1.9
carbon source
L-Arabinose
-0.8
N.D.
N.D.
+0.0
+1.9
carbon source
D-Glucose
-0.4
N.D.
N.D.
-0.1
+2.1
carbon source
L-Rhamnose
+0.0
N.D.
N.D.
+0.2
+1.9
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