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Fitness for 5 genes in
Escherichia coli Nissle 1917
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500 nt
ECOLIN_RS32100 and ECOLIN_RS17000 are separated by 810 nucleotides
ECOLIN_RS17000 and ECOLIN_RS17005 are separated by 71 nucleotides
ECOLIN_RS17005 and ECOLIN_RS17010 are separated by 23 nucleotides
ECOLIN_RS17010 and ECOLIN_RS17015 are separated by 9 nucleotides
ECOLIN_RS32100: ECOLIN_RS32100 - IS110 family transposase, at 3,419,790 to 3,419,960
_RS32100
ECOLIN_RS17000: ECOLIN_RS17000 - KpsF/GutQ family sugar-phosphate isomerase, at 3,420,771 to 3,421,754
_RS17000
ECOLIN_RS17005: ECOLIN_RS17005 - capsule polysaccharide export inner-membrane protein KpsE, at 3,421,826 to 3,422,974
_RS17005
ECOLIN_RS17010: ECOLIN_RS17010 - polysaccharide biosynthesis/export family protein, at 3,422,998 to 3,424,674
_RS17010
ECOLIN_RS17015: ECOLIN_RS17015 - 3-deoxy-manno-octulosonate cytidylyltransferase, at 3,424,684 to 3,425,424
_RS17015
Group
Condition
ECOLIN
_RS32100
ECOLIN
_RS17000
ECOLIN
_RS17005
ECOLIN
_RS17010
ECOLIN
_RS17015
phage
TP7
+0.0
-4.2
-2.9
-10.1
-7.9
phage
EV219
-0.2
-3.6
-4.6
-9.6
-6.6
phage
JK38
-0.1
-2.5
-3.4
-9.9
-4.4
phage
JK38
-0.2
-2.3
-3.4
-9.8
-3.9
phage
Bas31
-0.3
-2.8
-3.1
-9.9
-3.4
phage
Bas31
+0.0
-2.8
-5.2
-8.9
-2.6
phage
Bas37
-0.3
-2.7
-2.6
-9.8
-3.3
phage
Bas37
-0.4
-2.0
-3.4
-9.5
-3.0
phage
TP7
-0.3
-3.3
-2.9
-5.5
-6.1
phage
Bas38
-0.1
-1.4
-3.5
-10.3
-2.8
phage
EV219
-0.1
-2.2
-4.3
-8.2
-3.2
phage
Bas27
-0.3
-1.7
-3.9
-9.2
-2.1
phage
Bas22
-0.1
-1.6
-5.4
-7.1
-2.6
phage
Bas27
-0.1
-1.2
-2.9
-8.9
-2.1
phage
Bas05
-0.1
-0.9
-4.0
-9.1
-0.9
phage
Bas05
-0.6
-1.5
-3.4
-7.6
-1.1
phage
Bas21
+0.3
-1.9
-4.0
-5.8
-1.8
phage
Bas21
-0.1
-1.7
-2.8
-5.8
-2.5
phage
P1vir
+0.7
-0.9
-4.8
-7.2
-0.7
phage
CEV1
-0.0
-1.4
-2.9
-6.4
-1.9
phage
Bas04
-0.1
-0.4
-4.4
-7.6
-0.1
phage
Bas22
+0.5
-0.7
-4.8
-5.8
-1.8
phage
Bas48
+0.3
-1.1
-3.5
-7.1
-0.9
phage
Bas48
+0.5
-0.5
-5.3
-5.7
-1.3
phage
Bas45
+0.8
-2.9
-3.5
-3.4
-3.2
phage
JK16
+0.1
-0.6
-3.7
-6.3
-1.4
phage
Bas04
+0.0
-0.5
-2.2
-7.8
-0.8
phage
CEV1
+0.1
-0.1
-3.2
-7.0
-0.1
phage
JK16
-0.3
-0.7
-3.6
-4.2
-0.9
phage
Bas38
-0.1
-1.2
-2.1
-3.3
-1.9
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