Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS16325 and ECOLIN_RS16330 are separated by 218 nucleotidesECOLIN_RS16330 and ECOLIN_RS16335 are separated by 277 nucleotidesECOLIN_RS16335 and ECOLIN_RS16340 are separated by 203 nucleotidesECOLIN_RS16340 and ECOLIN_RS16345 are separated by 135 nucleotides ECOLIN_RS16325: ECOLIN_RS16325 - prohibitin family protein, at 3,309,223 to 3,310,131 _RS16325 ECOLIN_RS16330: ECOLIN_RS16330 - transketolase, at 3,310,350 to 3,312,341 _RS16330 ECOLIN_RS16335: ECOLIN_RS16335 - metalloprotease LoiP, at 3,312,619 to 3,313,377 _RS16335 ECOLIN_RS16340: ECOLIN_RS16340 - agmatinase, at 3,313,581 to 3,314,501 _RS16340 ECOLIN_RS16345: ECOLIN_RS16345 - hypothetical protein, at 3,314,637 to 3,315,368 _RS16345
Group Condition ECOLIN_RS16325 ECOLIN_RS16330 ECOLIN_RS16335 ECOLIN_RS16340 ECOLIN_RS16345
phage TP7 -0.1 -1.5 -0.4 -1.2 -0.3
phage JK38 -0.3 -1.6 -0.2 -1.1 -0.1
phage RB51 -0.6 -1.6 +0.0 -1.1 +0.1
carbon source Casamino-acids +0.1 -1.8 -0.1 -1.4 +0.1
carbon source Casamino-acids +0.2 -1.8 -0.3 -1.4 +0.1
phage Bas63 -0.2 -1.7 -0.1 -0.8 +0.0
carbon source Sodium-DL-Lactate +0.1 -2.1 -0.2 -0.2 -0.1
phage JK16 -0.3 -1.1 -0.3 -0.7 -0.2
phage Bas37 -0.0 -1.2 -0.2 -0.7 -0.4
phage JK16 -0.1 -1.2 -0.1 -0.6 -0.5
phage TP7 -0.3 -1.3 +0.0 -0.4 -0.4
phage Bas45 -0.2 -1.5 -0.1 -1.1 +0.5
carbon source Sodium-DL-Lactate +0.1 -2.0 -0.4 -0.0 +0.0
phage EV219 +0.5 -1.5 +0.1 -1.3 -0.1
phage Bas44 -0.3 -1.6 -0.1 -0.6 +0.5
phage EV219 +0.4 -1.5 +0.2 -0.8 -0.1
phage Bas37 +0.4 -1.1 -0.1 -0.4 -0.5
phage K20 -0.2 -1.2 +0.1 -0.6 +0.3
phage Bas52 +0.2 -1.4 -0.1 -0.6 +0.4
phage Bas51 +0.4 -1.3 -0.1 -0.8 +0.2
phage Bas44 -0.1 -1.1 -0.2 -0.6 +0.4
phage Bas27 +0.2 -1.4 +0.2 -0.5 +0.1
phage K20 +0.1 -1.3 -0.1 -0.6 +0.4
no phage control Control_Nissle +0.0 -1.3 -0.2 -0.6 +0.8
phage K25 -0.1 -1.0 -0.1 -0.6 +0.4
phage Bas22 +0.3 -1.2 +0.2 -0.6 +0.2
no phage control Control_Nissle -0.0 -1.1 +0.1 -0.6 +0.8
phage Bas38 -0.2 +0.9 -0.4 -0.9 -0.2
carbon source L-Arabinose -0.4 +1.5 -0.3 -0.3 +0.0
carbon source D-Glucose +0.3 +2.0 +0.2 +0.0 -0.0
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