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Protein
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Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS16150 and ECOLIN_RS16155 are separated by 163 nucleotides
ECOLIN_RS16155 and ECOLIN_RS16160 are separated by 44 nucleotides
ECOLIN_RS16160 and ECOLIN_RS16165 are separated by 165 nucleotides
ECOLIN_RS16165 and ECOLIN_RS16170 are separated by 117 nucleotides
ECOLIN_RS16150: ECOLIN_RS16150 - hemolysin III family protein, at 3,274,974 to 3,275,633
_RS16150
ECOLIN_RS16155: ECOLIN_RS16155 - N(4)-acetylcytidine aminohydrolase, at 3,275,797 to 3,276,108
_RS16155
ECOLIN_RS16160: ECOLIN_RS16160 - 6-phospho-beta-glucosidase BglA, at 3,276,153 to 3,277,586
_RS16160
ECOLIN_RS16165: ECOLIN_RS16165 - aminomethyl-transferring glycine dehydrogenase, at 3,277,752 to 3,280,625
_RS16165
ECOLIN_RS16170: ECOLIN_RS16170 - glycine cleavage system protein GcvH, at 3,280,743 to 3,281,132
_RS16170
Group
Condition
ECOLIN
_RS16150
ECOLIN
_RS16155
ECOLIN
_RS16160
ECOLIN
_RS16165
ECOLIN
_RS16170
phage
EV219
+0.0
-4.6
+0.0
+0.2
+0.4
carbon source
L-Rhamnose
+0.3
-3.0
+0.2
-0.2
-0.4
phage
Bas63
-0.0
-3.3
+0.2
-0.2
+0.2
phage
Bas63
-0.0
-3.2
+0.1
+0.1
+0.2
carbon source
L-Rhamnose
-0.4
-0.9
-0.2
-0.2
-0.8
phage
Phi92
-0.2
-1.8
-0.0
-0.2
-0.2
phage
K20
-0.1
-1.8
-0.0
+0.0
+0.0
carbon source
Casamino-acids
-0.3
-0.6
-0.1
-0.3
-0.6
phage
Bas44
-0.0
-0.4
-0.1
-0.6
-0.5
phage
K25
-0.2
-1.4
+0.0
+0.2
-0.1
phage
Bas45
+0.2
-1.4
-0.2
-0.1
+0.0
carbon source
Casamino-acids
+0.2
-0.6
+0.1
-0.7
-0.5
phage
Bas38
-0.1
-0.5
-0.1
-0.3
-0.1
phage
K25
+0.0
-0.9
-0.2
+0.1
+0.1
phage
Bas38
-0.5
+1.5
+0.1
-0.4
-0.4
phage
Bas52
-0.1
+1.1
-0.0
-0.0
-0.4
phage
Bas37
-0.2
+0.9
-0.1
+0.0
+0.2
phage
Bas10
+0.3
+0.6
-0.0
-0.2
+0.1
phage
Bas22
+0.3
+0.2
-0.2
+0.1
+0.4
phage
Bas04
+0.1
+0.8
-0.3
+0.1
+0.1
phage
Bas27
-0.1
+0.9
+0.1
-0.1
+0.0
phage
JK38
-0.1
+0.7
-0.0
+0.2
+0.2
phage
Bas68
-0.0
+1.2
-0.0
-0.0
-0.2
phage
EV219
+0.3
-0.2
+0.0
+0.4
+0.5
phage
Bas31
+0.2
+0.4
+0.3
+0.2
+0.1
phage
Bas31
-0.0
+1.1
-0.0
+0.0
+0.3
carbon source
L-Arabinose
-0.1
+0.9
-0.2
+0.7
+0.3
phage
Bas22
-0.2
+0.5
+0.0
+0.6
+0.7
phage
Bas21
-0.0
+0.5
-0.1
+1.2
+1.4
phage
Bas21
+0.0
+1.0
+0.1
+1.3
+1.2
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