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Protein
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Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS16060 and ECOLIN_RS16065 are separated by 17 nucleotides
ECOLIN_RS16065 and ECOLIN_RS16070 are separated by 35 nucleotides
ECOLIN_RS16070 and ECOLIN_RS16075 are separated by 35 nucleotides
ECOLIN_RS16075 and ECOLIN_RS16080 overlap by 1 nucleotides
ECOLIN_RS16060: ECOLIN_RS16060 - xanthine/proton symporter XanQ, at 3,256,906 to 3,258,306
_RS16060
ECOLIN_RS16065: ECOLIN_RS16065 - guanine deaminase, at 3,258,324 to 3,259,640
_RS16065
ECOLIN_RS16070: ECOLIN_RS16070 - guanine/hypoxanthine transporter GhxQ, at 3,259,676 to 3,261,043
_RS16070
ECOLIN_RS16075: ECOLIN_RS16075 - 4Fe-4S dicluster domain-containing protein, at 3,261,079 to 3,261,567
_RS16075
ECOLIN_RS16080: ECOLIN_RS16080 - formate-dependent uric acid utilization protein YgfT, at 3,261,567 to 3,263,486
_RS16080
Group
Condition
ECOLIN
_RS16060
ECOLIN
_RS16065
ECOLIN
_RS16070
ECOLIN
_RS16075
ECOLIN
_RS16080
phage
K25
+0.0
N.D.
+0.1
-2.7
+0.1
phage
RB68
-0.1
N.D.
+0.8
-2.2
+0.1
no phage control
Control_Nissle
-0.0
N.D.
+0.2
-1.5
+0.1
phage
Bas63
-0.0
N.D.
-0.2
-1.1
+0.2
phage
Bas48
-0.0
N.D.
+0.1
-1.7
+0.5
phage
K25
+0.0
N.D.
-0.1
-1.3
+0.4
phage
Bas63
-0.1
N.D.
+0.0
-0.6
-0.3
phage
Bas22
-0.1
N.D.
+0.7
-1.8
+0.3
phage
RB51
+0.0
N.D.
-0.2
-0.8
+0.1
phage
P1vir
+0.2
N.D.
-0.2
-1.0
+0.3
phage
Bas52
-0.2
N.D.
+0.3
-0.6
-0.1
no phage control
Control_Nissle
+0.0
N.D.
+0.7
-1.4
+0.3
phage
Bas68
+0.1
N.D.
+0.5
-0.1
-0.8
phage
Bas51
-0.1
N.D.
+0.2
-0.2
-0.2
phage
Bas45
-0.1
N.D.
+0.2
-0.7
+0.4
phage
Bas44
-0.3
N.D.
+0.3
-0.2
+0.1
phage
Bas52
+0.1
N.D.
-0.8
+0.4
+0.4
phage
Bas44
+0.0
N.D.
+0.1
-0.0
+0.0
phage
K20
-0.2
N.D.
+0.2
-0.1
+0.4
phage
K20
-0.1
N.D.
+0.4
+0.3
-0.2
phage
RB51
+0.1
N.D.
+0.3
-0.5
+0.5
phage
RB68
+0.4
N.D.
+0.2
-0.0
+0.0
phage
P1vir
-0.1
N.D.
+0.3
-0.3
+0.6
phage
Bas48
-0.0
N.D.
+0.2
+0.2
+0.4
phage
Bas22
-0.2
N.D.
+0.5
-0.2
+0.7
phage
Bas68
+0.2
N.D.
+0.5
-0.2
+1.0
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ECOLIN_RS16070
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