Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS16020 and ECOLIN_RS16025 are separated by 40 nucleotidesECOLIN_RS16025 and ECOLIN_RS16030 are separated by 47 nucleotidesECOLIN_RS16030 and ECOLIN_RS16035 are separated by 103 nucleotidesECOLIN_RS16035 and ECOLIN_RS16040 are separated by 321 nucleotides ECOLIN_RS16020: ECOLIN_RS16020 - carbamate kinase, at 3,244,195 to 3,245,127 _RS16020 ECOLIN_RS16025: ECOLIN_RS16025 - selenium-dependent molybdenum cofactor biosynthesis protein YqeB, at 3,245,168 to 3,246,793 _RS16025 ECOLIN_RS16030: ECOLIN_RS16030 - selenium cofactor biosynthesis protein YqeC, at 3,246,841 to 3,247,611 _RS16030 ECOLIN_RS16035: ECOLIN_RS16035 - molybdenum cofactor cytidylyltransferase, at 3,247,715 to 3,248,293 _RS16035 ECOLIN_RS16040: ECOLIN_RS16040 - putative selenate reductase subunit YgfK, at 3,248,615 to 3,251,713 _RS16040
Group Condition ECOLIN_RS16020 ECOLIN_RS16025 ECOLIN_RS16030 ECOLIN_RS16035 ECOLIN_RS16040
phage Bas68 +0.3 -0.0 -0.2 -2.5 +0.1
phage P1vir -0.6 -0.6 -0.1 -0.3 -0.1
phage Bas22 -0.2 -0.0 +0.0 -1.3 +0.0
phage Bas45 -0.2 -0.3 +0.2 -0.8 -0.3
phage RB68 +0.4 -0.2 +0.1 -1.7 +0.1
no phage control Control_Nissle -0.1 +0.0 +0.2 -1.5 +0.0
phage Bas68 -0.2 +0.0 +0.2 -1.1 -0.1
carbon source L-Arabinose -0.2 -0.2 -0.0 -0.9 +0.1
phage Bas05 +0.3 -0.2 +0.0 -1.1 +0.0
phage RB51 -0.1 +0.1 +0.2 -1.1 -0.1
phage Bas63 +0.1 -0.1 -0.3 -0.5 -0.1
carbon source D-Glucose -0.1 +0.4 +0.1 -1.3 +0.1
carbon source L-Rhamnose +0.1 +0.2 -0.3 -1.2 +0.3
no phage control Control_Nissle +0.2 -0.3 +0.2 -0.9 +0.1
phage Bas05 -0.2 -0.1 -0.0 -0.5 +0.1
phage K25 +0.1 -0.5 +0.0 -0.3 -0.0
phage Bas44 +0.2 -0.4 +0.3 -0.7 +0.0
phage K20 +0.1 -0.3 +0.3 -0.9 +0.1
phage Bas51 +0.1 +0.1 +0.1 -0.7 -0.1
phage Phi92 -0.0 +0.2 -0.2 -0.6 +0.0
phage Bas52 +0.3 -0.2 +0.1 -0.6 -0.0
phage Bas38 +0.2 -0.0 +0.2 -0.6 -0.1
phage Bas52 +0.4 -0.1 +0.1 -0.5 +0.0
carbon source L-Rhamnose +0.2 -0.0 -0.5 +0.4 -0.1
phage JK16 +0.3 -0.3 +0.0 +0.2 -0.2
carbon source Sodium-DL-Lactate -0.1 -0.3 -0.0 +0.6 -0.1
carbon source D-Glucose -0.2 +0.1 -0.2 +0.5 -0.0
phage Bas10 +0.2 -0.3 -0.1 +0.4 +0.0
phage Bas04 +0.4 -0.1 -0.2 +0.3 +0.1
carbon source Casamino-acids +0.1 -0.2 +0.1 +0.6 +0.0
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