Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS15790 and ECOLIN_RS15795 are separated by 71 nucleotidesECOLIN_RS15795 and ECOLIN_RS15800 are separated by 2 nucleotidesECOLIN_RS15800 and ECOLIN_RS15805 overlap by 1 nucleotidesECOLIN_RS15805 and ECOLIN_RS15810 are separated by 31 nucleotides ECOLIN_RS15790: ECOLIN_RS15790 - phosphoglycerate dehydrogenase, at 3,186,144 to 3,187,091 _RS15790 ECOLIN_RS15795: ECOLIN_RS15795 - SIS domain-containing protein, at 3,187,163 to 3,187,759 _RS15795 ECOLIN_RS15800: ECOLIN_RS15800 - PatB family C-S lyase, at 3,187,762 to 3,188,937 _RS15800 ECOLIN_RS15805: ECOLIN_RS15805 - PTS transporter subunit EIIC, at 3,188,937 to 3,190,517 _RS15805 ECOLIN_RS15810: ECOLIN_RS15810 - PRD domain-containing protein, at 3,190,549 to 3,191,373 _RS15810
Group Condition ECOLIN_RS15790 ECOLIN_RS15795 ECOLIN_RS15800 ECOLIN_RS15805 ECOLIN_RS15810
carbon source L-Rhamnose +1.1 N.D. N.D. -3.1 N.D.
phage Bas52 +0.2 N.D. N.D. -2.1 N.D.
carbon source D-Glucose -0.9 N.D. N.D. -0.9 N.D.
phage K25 -1.4 N.D. N.D. +0.1 N.D.
phage K20 -1.3 N.D. N.D. +0.1 N.D.
phage RB51 -0.6 N.D. N.D. -0.5 N.D.
phage Bas63 -1.5 N.D. N.D. +0.5 N.D.
phage Bas68 -0.6 N.D. N.D. -0.3 N.D.
phage Bas44 -0.8 N.D. N.D. -0.0 N.D.
carbon source L-Rhamnose -0.4 N.D. N.D. -0.3 N.D.
phage Bas44 -0.9 N.D. N.D. +0.4 N.D.
phage Bas68 -0.8 N.D. N.D. +0.3 N.D.
phage JK16 -0.6 N.D. N.D. +0.3 N.D.
carbon source Sodium-DL-Lactate +0.3 N.D. N.D. -0.5 N.D.
phage K20 -0.5 N.D. N.D. +0.4 N.D.
phage Bas31 -0.5 N.D. N.D. +0.4 N.D.
carbon source Casamino-acids -0.5 N.D. N.D. +0.4 N.D.
phage TP7 +0.5 N.D. N.D. -0.5 N.D.
phage RB68 -0.6 N.D. N.D. +0.7 N.D.
phage Bas05 +0.7 N.D. N.D. -0.5 N.D.
phage Bas38 +0.6 N.D. N.D. -0.4 N.D.
phage Bas10 +0.7 N.D. N.D. -0.3 N.D.
phage P1vir -0.5 N.D. N.D. +0.9 N.D.
phage Bas21 +0.8 N.D. N.D. -0.4 N.D.
carbon source D-Glucose +0.2 N.D. N.D. +0.6 N.D.
no phage control Control_Nissle -0.3 N.D. N.D. +1.2 N.D.
phage EV219 +1.2 N.D. N.D. -0.2 N.D.
phage Phi92 +0.3 N.D. N.D. +0.8 N.D.
phage CEV1 +1.1 N.D. N.D. +0.4 N.D.
phage Bas04 +1.2 N.D. N.D. +0.4 N.D.
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