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Protein
Homologs
Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS15430 and ECOLIN_RS15435 are separated by 147 nucleotides
ECOLIN_RS15435 and ECOLIN_RS15440 overlap by 4 nucleotides
ECOLIN_RS15440 and ECOLIN_RS15445 overlap by 23 nucleotides
ECOLIN_RS15445 and ECOLIN_RS15450 are separated by 21 nucleotides
ECOLIN_RS15430: ECOLIN_RS15430 - glycerol-3-phosphate responsive antiterminator, at 3,103,285 to 3,103,861
_RS15430
ECOLIN_RS15435: ECOLIN_RS15435 - electron transfer flavoprotein subunit alpha/FixB family protein, at 3,104,009 to 3,104,869
_RS15435
ECOLIN_RS15440: ECOLIN_RS15440 - electron transfer flavoprotein subunit beta/FixA family protein, at 3,104,866 to 3,105,642
_RS15440
ECOLIN_RS15445: ECOLIN_RS15445 - MFS transporter, at 3,105,620 to 3,107,029
_RS15445
ECOLIN_RS15450: ECOLIN_RS15450 - FAD-binding oxidoreductase, at 3,107,051 to 3,108,505
_RS15450
Group
Condition
ECOLIN
_RS15430
ECOLIN
_RS15435
ECOLIN
_RS15440
ECOLIN
_RS15445
ECOLIN
_RS15450
carbon source
L-Rhamnose
-0.0
N.D.
-0.2
-2.0
-0.1
phage
Phi92
-0.4
N.D.
-0.4
-1.0
-0.1
phage
K25
+0.1
N.D.
-0.7
+0.1
-1.0
carbon source
D-Glucose
+0.1
N.D.
-0.2
-0.9
-0.3
phage
Bas52
-0.4
N.D.
+0.3
-0.5
-0.5
phage
Bas27
+0.1
N.D.
-0.8
-0.2
-0.2
phage
Bas63
-0.7
N.D.
+0.6
-0.1
-0.8
phage
TP7
-0.0
N.D.
-0.2
+0.3
-0.9
phage
Bas48
+0.2
N.D.
+0.3
-0.4
-0.7
phage
Bas31
+0.0
N.D.
-0.0
+0.3
-0.8
phage
RB51
-0.5
N.D.
+0.5
-0.5
+0.1
no phage control
Control_Nissle
-0.3
N.D.
+0.4
-0.2
-0.3
phage
P1vir
-0.7
N.D.
+0.6
-0.6
+0.4
phage
Bas27
+0.5
N.D.
-0.1
-0.2
-0.5
phage
Bas52
-0.5
N.D.
-0.7
+0.7
+0.2
phage
JK16
-0.2
N.D.
+0.1
+0.5
-0.6
phage
Bas10
+0.3
N.D.
+0.5
-0.4
-0.2
phage
Bas63
-0.5
N.D.
-0.1
+0.2
+0.6
carbon source
D-Glucose
+1.0
N.D.
-0.2
-1.0
+0.5
phage
Bas48
-0.1
N.D.
+1.1
+0.3
-1.0
phage
Bas44
+0.3
N.D.
+0.4
-0.5
+0.1
phage
K20
-0.1
N.D.
+0.6
-0.6
+0.6
phage
EV219
-0.4
N.D.
+0.5
+0.4
+0.0
phage
Bas04
-0.1
N.D.
-0.2
+0.7
+0.2
phage
RB51
-0.4
N.D.
-0.1
+0.2
+1.0
phage
Bas51
-0.2
N.D.
+0.6
+0.1
+0.5
carbon source
L-Rhamnose
-0.4
N.D.
-0.2
+1.0
+0.5
phage
EV219
-0.2
N.D.
+0.4
+0.8
+0.1
phage
Bas68
+0.1
N.D.
+0.4
+0.7
-0.1
phage
K20
-0.1
N.D.
+0.7
+0.3
+0.5
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