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Protein
Homologs
Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS15070 and ECOLIN_RS15075 are separated by 256 nucleotides
ECOLIN_RS15075 and ECOLIN_RS15080 overlap by 4 nucleotides
ECOLIN_RS15080 and ECOLIN_RS15085 are separated by 10 nucleotides
ECOLIN_RS15085 and ECOLIN_RS15090 are separated by 3 nucleotides
ECOLIN_RS15070: ECOLIN_RS15070 - lytic murein transglycosylase B, at 3,034,633 to 3,035,718
_RS15070
ECOLIN_RS15075: ECOLIN_RS15075 - PTS glucitol/sorbitol transporter subunit IIC, at 3,035,975 to 3,036,538
_RS15075
ECOLIN_RS15080: ECOLIN_RS15080 - PTS glucitol/sorbitol transporter subunit IIB, at 3,036,535 to 3,037,494
_RS15080
ECOLIN_RS15085: ECOLIN_RS15085 - PTS glucitol/sorbitol transporter subunit IIA, at 3,037,505 to 3,037,876
_RS15085
ECOLIN_RS15090: ECOLIN_RS15090 - sorbitol-6-phosphate dehydrogenase, at 3,037,880 to 3,038,659
_RS15090
Group
Condition
ECOLIN
_RS15070
ECOLIN
_RS15075
ECOLIN
_RS15080
ECOLIN
_RS15085
ECOLIN
_RS15090
carbon source
Casamino-acids
N.D.
-0.3
-0.4
+0.1
-0.3
carbon source
L-Rhamnose
N.D.
+0.1
-0.3
-0.8
+0.2
carbon source
L-Arabinose
N.D.
+0.4
-0.3
-0.6
-0.2
phage
Bas52
N.D.
-0.0
-0.3
-0.6
+0.2
phage
RB51
N.D.
+0.1
+0.1
-0.8
-0.0
carbon source
Casamino-acids
N.D.
+0.2
-0.8
-0.1
+0.2
phage
TP7
N.D.
+0.3
-0.4
-0.3
-0.2
phage
K20
N.D.
+0.1
-0.0
-0.6
+0.1
phage
Bas22
N.D.
-0.0
+0.3
-1.0
+0.3
phage
Bas44
N.D.
+0.3
+0.2
-0.7
+0.0
phage
Bas48
N.D.
+0.5
+0.1
-0.8
-0.1
phage
Phi92
N.D.
-0.3
-0.4
+0.6
-0.0
no phage control
Control_Nissle
N.D.
-0.2
-0.2
-0.0
+0.5
phage
Bas10
N.D.
+0.3
-0.0
+0.2
-0.3
phage
TP7
N.D.
+0.6
-0.4
+0.1
-0.1
phage
CEV1
N.D.
+0.0
+0.4
+0.2
-0.2
phage
Bas68
N.D.
+0.3
+0.1
-0.3
+0.4
phage
JK38
N.D.
+0.3
-0.2
+0.4
-0.1
phage
Phi92
N.D.
+0.4
-0.1
+0.3
-0.1
phage
Bas48
N.D.
+0.3
+0.4
-0.1
-0.0
phage
Bas21
N.D.
+0.3
+0.7
-0.1
-0.4
carbon source
D-Glucose
N.D.
-0.3
-0.1
+0.8
+0.4
phage
EV219
N.D.
-0.1
+0.4
+0.6
+0.1
phage
Bas21
N.D.
+0.4
+0.2
+0.4
-0.1
phage
Bas05
N.D.
+0.3
+0.2
+0.4
+0.1
phage
Bas37
N.D.
+0.6
+0.2
+0.1
+0.1
phage
EV219
N.D.
+0.3
+0.4
+0.4
+0.1
phage
Bas63
N.D.
+0.0
+0.1
+0.4
+0.6
phage
Bas27
N.D.
+0.4
+0.1
+0.7
-0.0
phage
RB68
N.D.
+0.7
+0.4
-0.2
+0.4
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