Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS14895 and ECOLIN_RS14900 are separated by 56 nucleotidesECOLIN_RS14900 and ECOLIN_RS14905 are separated by 87 nucleotidesECOLIN_RS14905 and ECOLIN_RS14910 are separated by 207 nucleotidesECOLIN_RS14910 and ECOLIN_RS14915 overlap by 4 nucleotides ECOLIN_RS14895: ECOLIN_RS14895 - DUF883 domain-containing protein, at 3,006,487 to 3,006,816 _RS14895 ECOLIN_RS14900: ECOLIN_RS14900 - PLP-dependent aminotransferase family protein, at 3,006,873 to 3,008,207 _RS14900 ECOLIN_RS14905: ECOLIN_RS14905 - carboxymuconolactone decarboxylase family protein, at 3,008,295 to 3,008,726 _RS14905 ECOLIN_RS14910: ECOLIN_RS14910 - glutaredoxin-like protein NrdH, at 3,008,934 to 3,009,179 _RS14910 ECOLIN_RS14915: ECOLIN_RS14915 - class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI, at 3,009,176 to 3,009,586 _RS14915
Group Condition ECOLIN_RS14895 ECOLIN_RS14900 ECOLIN_RS14905 ECOLIN_RS14910 ECOLIN_RS14915
phage Bas45 N.D. +0.1 -0.0 -0.2 -1.0
phage Bas38 N.D. +0.4 -0.8 -0.1 -0.4
phage Bas21 N.D. +0.3 -0.1 -0.7 -0.3
phage Bas68 N.D. +0.1 +0.2 -0.5 -0.5
phage EV219 N.D. +0.4 -0.6 -0.1 -0.4
phage Bas10 N.D. +0.3 -0.4 -0.7 +0.1
phage Bas31 N.D. +0.2 -1.1 +0.0 +0.2
phage Bas21 N.D. +0.6 -0.7 +0.1 -0.5
phage CEV1 N.D. +0.1 +0.1 -0.8 +0.3
phage Bas22 N.D. +0.1 +0.3 -0.5 -0.2
phage K25 N.D. +0.1 +0.3 -0.8 +0.3
carbon source L-Rhamnose N.D. -0.5 -0.5 +1.5 -0.6
phage Bas31 N.D. +0.2 -0.2 -0.4 +0.4
phage TP7 N.D. +0.6 -0.2 +0.1 -0.4
no phage control Control_Nissle N.D. +0.3 +0.5 -0.6 -0.1
phage RB51 N.D. -0.4 -0.0 +0.6 +0.3
phage Bas27 N.D. +0.5 -0.5 +0.1 +0.4
no phage control Control_Nissle N.D. -0.2 +0.5 -0.2 +0.5
phage Bas27 N.D. +0.5 -0.5 +0.6 -0.0
phage Bas63 N.D. +0.2 -0.3 -0.0 +0.7
phage Phi92 N.D. +0.1 -0.3 +0.5 +0.3
phage Bas44 N.D. +0.0 +0.7 -0.3 +0.2
phage Bas52 N.D. +0.2 +0.6 -0.5 +0.4
phage JK16 N.D. +0.2 -0.3 +0.6 +0.3
phage EV219 N.D. +0.5 -0.4 +0.5 +0.3
phage Bas52 N.D. -0.2 +0.2 +0.3 +0.6
phage CEV1 N.D. +0.5 +0.3 -0.1 +0.4
carbon source L-Rhamnose N.D. +0.2 +0.3 -0.2 +0.9
phage Bas48 N.D. +0.3 +0.5 +0.3 +0.2
carbon source D-Glucose N.D. +0.3 +0.3 +1.1 +0.5
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