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Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS14875 and ECOLIN_RS14880 are separated by 46 nucleotides
ECOLIN_RS14880 and ECOLIN_RS14885 are separated by 666 nucleotides
ECOLIN_RS14885 and ECOLIN_RS14890 are separated by 36 nucleotides
ECOLIN_RS14890 and ECOLIN_RS14895 are separated by 151 nucleotides
ECOLIN_RS14875: ECOLIN_RS14875 - thiosulfate sulfurtransferase YgaP, at 3,003,863 to 3,004,387
_RS14875
ECOLIN_RS14880: ECOLIN_RS14880 - DNA-binding protein StpA, at 3,004,434 to 3,004,838
_RS14880
ECOLIN_RS14885: ECOLIN_RS14885 - L-alanine exporter AlaE, at 3,005,505 to 3,005,954
_RS14885
ECOLIN_RS14890: ECOLIN_RS14890 - DUF2002 family protein, at 3,005,991 to 3,006,335
_RS14890
ECOLIN_RS14895: ECOLIN_RS14895 - DUF883 domain-containing protein, at 3,006,487 to 3,006,816
_RS14895
Group
Condition
ECOLIN
_RS14875
ECOLIN
_RS14880
ECOLIN
_RS14885
ECOLIN
_RS14890
ECOLIN
_RS14895
phage
RB51
N.D.
N.D.
-0.2
-0.7
N.D.
phage
Bas68
N.D.
N.D.
+0.1
-1.0
N.D.
phage
Bas05
N.D.
N.D.
+0.0
-0.9
N.D.
phage
K20
N.D.
N.D.
-0.1
-0.6
N.D.
phage
K20
N.D.
N.D.
-0.3
-0.4
N.D.
phage
Bas44
N.D.
N.D.
-0.2
-0.5
N.D.
phage
Phi92
N.D.
N.D.
-0.4
-0.2
N.D.
phage
Bas37
N.D.
N.D.
+0.1
-0.7
N.D.
phage
CEV1
N.D.
N.D.
+0.1
-0.7
N.D.
phage
CEV1
N.D.
N.D.
+0.2
-0.8
N.D.
phage
Bas48
N.D.
N.D.
+0.3
-0.6
N.D.
phage
Bas22
N.D.
N.D.
+0.3
-0.6
N.D.
phage
Bas52
N.D.
N.D.
+0.2
-0.4
N.D.
phage
Phi92
N.D.
N.D.
+0.2
-0.4
N.D.
phage
Bas63
N.D.
N.D.
+0.2
-0.3
N.D.
phage
EV219
N.D.
N.D.
+0.3
-0.2
N.D.
phage
Bas31
N.D.
N.D.
-0.1
+0.4
N.D.
phage
JK38
N.D.
N.D.
+0.5
-0.2
N.D.
phage
K25
N.D.
N.D.
+0.5
+0.0
N.D.
carbon source
Sodium-DL-Lactate
N.D.
N.D.
+0.1
+0.4
N.D.
phage
Bas21
N.D.
N.D.
+0.2
+0.4
N.D.
carbon source
Sodium-DL-Lactate
N.D.
N.D.
-0.1
+0.7
N.D.
carbon source
L-Rhamnose
N.D.
N.D.
-0.1
+0.7
N.D.
phage
EV219
N.D.
N.D.
+0.3
+0.3
N.D.
phage
Bas38
N.D.
N.D.
+0.5
+0.1
N.D.
phage
Bas45
N.D.
N.D.
+0.2
+0.5
N.D.
carbon source
L-Rhamnose
N.D.
N.D.
+0.2
+0.4
N.D.
carbon source
L-Arabinose
N.D.
N.D.
+0.5
+0.4
N.D.
carbon source
D-Glucose
N.D.
N.D.
+0.2
+0.6
N.D.
phage
Bas52
N.D.
N.D.
+0.5
+0.4
N.D.
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